Nocardia yunnanensis: D7D52_25865
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Entry
D7D52_25865 CDS
T09774
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
nyu
Nocardia yunnanensis
Pathway
nyu00750
Vitamin B6 metabolism
nyu01100
Metabolic pathways
nyu01240
Biosynthesis of cofactors
Module
nyu_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
D7D52_25865 (pdxS)
Enzymes [BR:
nyu01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
D7D52_25865 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
NMO
IGPS
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
AYF76673
UniProt:
A0A386ZHK0
LinkDB
All DBs
Position
complement(5506755..5507657)
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AA seq
300 aa
AA seq
DB search
MTTPDTTPTIGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRA
QGGVSRMSDPDMIDGIIEAVSIPVMAKARIGHFVEAQILQSLGVDYIDESEVLTPADYAN
HIDKFAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRTIRAEIRRL
TSLSKDELYVAAKELQAPYELVCEVAETGKLPVVMFTAGGIATPADAAMMMQLGAEGVFV
GSGIFKSGNPAQRAAAIVKATTFHDDPDVLAKVSRGLGEAMVGINVEEIPQPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacgcccgacaccacgcccaccatcggtaccgcccgcgtcaagcgcggcatggcc
gagatgctgaagggcggtgtgatcatggacgtcgtcacgcccgagcaggccaagatcgcc
gaggacgccggcgccgtcgcggtcatggcgctcgagcgggtcccggccgacattcgcgcc
cagggcggcgtctcccgcatgtcggatccggacatgatcgacggcatcatcgaggccgtc
tccatccccgtcatggccaaggcgcgcatcggccacttcgtcgaggcgcagatcctgcag
tcgctcggcgtcgactacatcgacgagtccgaggtgctgaccccggccgactacgccaac
cacatcgacaagttcgccttcaccgtgccgttcgtgtgcggcgcgaccaacctgggcgag
gcgctgcgccggatcaccgagggcgcggccatgattcgctccaagggtgaggccggcacc
ggcgacgtctccaacgccaccacccacatgcgcaccatccgcgccgagatccgccgcctg
acctcgctgtccaaggacgagctgtacgtggccgccaaggaactgcaggccccctacgag
ctggtgtgcgaggtcgccgagaccggcaagctgcccgtggtcatgttcaccgccggtggc
atcgccaccccggccgacgcggccatgatgatgcagctcggcgccgagggcgtgttcgtc
ggctccggaatcttcaagtccggcaacccggctcagcgggccgccgccatcgtcaaggcc
accaccttccacgacgacccggacgtgctggcgaaggtctcgcgcggtctgggcgaggcc
atggtcggcatcaatgtcgaggagatcccgcagccgcaccgcctcgccgagcgcggctgg
taa
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