Nocardia yunnanensis: D7D52_27830
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Entry
D7D52_27830 CDS
T09774
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nyu
Nocardia yunnanensis
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nyu03032
]
D7D52_27830
03400 DNA repair and recombination proteins [BR:
nyu03400
]
D7D52_27830
Enzymes [BR:
nyu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D7D52_27830
DNA replication proteins [BR:
nyu03032
]
Prokaryotic type
DNA Topoisomerases
D7D52_27830
DNA repair and recombination proteins [BR:
nyu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D7D52_27830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AYF76981
UniProt:
A0A386ZHI9
LinkDB
All DBs
Position
complement(5884459..5885490)
Genome browser
AA seq
343 aa
AA seq
DB search
MRLRRSTIDGAGIIRRRRGRGFSYTTTAGEVVRDAQTLERIRALVIPPAWREVWICPDTC
GHIQAVGLDAAGRRQYLYHEQWRRERDEEKFDRVLDLATRLPTMRERLRTDLRGRGLGEH
RVLAAAITLLDSGVVRVGGEEYADSNGSHGVATLLREHVRVRRDEIALDFPAKSGVQCQA
EIRDEALAKTLRALLTARTGSERVFVYRDRAGTHEVHADTINARFRDLVGAEFSVKDLRT
WEANVLAAAGLATAPRPGSQRQRTAVLKRVMTDVAQLLGNTPAVVRASYVDPRLIRAFDN
GETIASAIARAQRSDDPDVQRDIVDRAVIRLLRRAAHQKSASG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgcggcgcagcaccatcgacggtgccgggatcattcggcgccggcgtggccga
gggttctcctacaccaccaccgccggggaggtggtgcgtgacgcgcagaccctggaacgc
attcgcgcactggtgattccgcccgcttggcgggaggtgtggatctgtcccgacacctgc
ggtcacattcaggcggtcgggctcgacgcggccgggcggcggcagtacctctaccacgag
cagtggcggcgcgaacgcgacgaggagaagttcgaccgggtgctcgacctggccacccgg
ctgccgaccatgcgcgaacgcctgcgcaccgatctgcgcgggcgcggtctgggcgaacat
cgagtcctggccgccgcgatcacactgctggattcgggcgtggtgcgggtgggcggggaa
gagtacgccgactccaacggctcgcacggggtcgcgacgctgctgcgcgagcatgtccgg
gtgcggcgtgacgagatcgccctggattttcccgccaagagcggcgtccaatgccaggcc
gagatccgcgacgaggcgctggcgaagaccttgcgggcgttgctgaccgcccgcaccggc
agcgagcgcgtcttcgtgtatcgcgaccgcgcggggacgcacgaggtgcacgccgacacc
atcaacgcgcggttccgcgacctcgtcggtgcggagttcagcgtcaaggatctgcggacg
tgggaggccaatgtgctcgccgcggccgggctcgcgaccgcgccgcggcccggatcgcag
cggcagcgcacggcggtgctcaaacgggtgatgacggatgtggcgcagctgctgggcaat
acgcccgcggtcgtgcgcgcctcctatgtcgatccccgcctgatccgcgccttcgacaat
ggcgagacgatcgcctcggccatcgcccgcgcgcaacgctccgacgaccccgacgttcag
cgcgacatcgtcgatcgcgctgtgattcggctcctgcggcgggcggcgcatcaaaagagc
gccagcgggtag
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