Nocardia yunnanensis: D7D52_29595
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Entry
D7D52_29595 CDS
T09774
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nyu
Nocardia yunnanensis
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nyu03016
]
D7D52_29595 (truB)
Enzymes [BR:
nyu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D7D52_29595 (truB)
Transfer RNA biogenesis [BR:
nyu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D7D52_29595 (truB)
Prokaryotic type
D7D52_29595 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
Motif
Other DBs
NCBI-ProteinID:
AYF77288
UniProt:
A0A386ZIB0
LinkDB
All DBs
Position
complement(6324125..6325078)
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AA seq
317 aa
AA seq
DB search
MATRAPRREKLPPLVDGFGGLLIVDKDGGWTSHDVVAKCRGILRTKKVGHAGTLDPMATG
VLVLGVERATKLLGQLILTTKAYTATIRLGQSTMTDDAEGEVTATTAAGHLTDAEIASRI
AELTGDIMQVPATVSAIKINGERAYARARAGEEVELAARPVTVSRFEVLARRDIDTGTTS
FVDLDVEVECSSGTYIRALARDLGEKLGVGGHLTALRRTRVGPFTLEHARTLEQVNAAAA
AGEPPLSLDIDTAVRTAFPVREITDAQAGDLRNGRWLEPIGRQGVYAAIDPAGRAIALLE
ESGKRAASIMVVRPANL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgggcgccccggcgcgagaagctgccgcccctggtggacggtttcggcgga
ctgctgatcgtcgacaaggacggcggctggaccagccatgacgtggtggccaaatgccgg
ggcatcctgcgcaccaagaaggtcgggcacgccggcaccctggatcccatggccaccggc
gtgctggtgctcggcgtggaacgggcgaccaaactgctgggccaactgatcctgaccacc
aaggcctacaccgccaccatccggctgggtcaatccaccatgaccgacgatgccgagggc
gaggtgaccgcgaccaccgcggccgggcatctcaccgatgccgagatcgcctcgcgcatc
gccgaattgaccggcgacatcatgcaggtgcccgccaccgtcagcgccatcaagatcaat
ggtgagcgtgcctacgcccgcgcccgcgccggcgaggaggtggagctggccgcccggccg
gtcacggtgagccgcttcgaggtgctggcccgccgcgacatcgacaccggcacaacctcg
ttcgtggatctggatgtcgaggtggagtgctcctcggggacctacattcgcgccctcgcc
cgtgatctcggtgaaaagctcggcgtcggagggcatctcaccgccttgcgccgcacccgg
gtcgggccgttcaccctcgaacacgcgcgcaccctcgagcaggtgaacgccgccgccgcg
gcgggtgagccgccgctgagcctggatatcgacaccgcggtgcgcaccgccttcccggtg
cgcgagatcaccgacgcccaggccggggatctgcgcaacggccgctggctggaaccgatc
ggccggcaaggcgtgtacgcggccatcgatccggcgggacgggccatcgcacttctcgag
gagtccggcaagcgggcggcgtcgatcatggtggtgcggcccgccaacctctga
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