Nocardia yunnanensis: D7D52_30345
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Entry
D7D52_30345 CDS
T09774
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nyu
Nocardia yunnanensis
Pathway
nyu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7D52_30345 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nyu03019
]
D7D52_30345 (recQ)
03400 DNA repair and recombination proteins [BR:
nyu03400
]
D7D52_30345 (recQ)
Enzymes [BR:
nyu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7D52_30345 (recQ)
Messenger RNA biogenesis [BR:
nyu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D7D52_30345 (recQ)
DNA repair and recombination proteins [BR:
nyu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D7D52_30345 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AYF79502
UniProt:
A0A386ZNY4
LinkDB
All DBs
Position
6470739..6472811
Genome browser
AA seq
690 aa
AA seq
DB search
MAVVSAPEVETAVGSLVDAGSDPAHQVLRKTFGYDSFRGPQRDIVEQVISGGDALVLMPT
GGGKSLCYQIPALVRPGVGVVVSPLIALMQDQVDALQAVGVRAGFLNSTQFPDERRTVEA
QFVAGELDVLYLAPERLRLESTAQLLDRGKISVFAIDEAHCVSQWGHDFRPDYLGLSMLH
ERWPDVPRIALTATATEATRKEIAERLDLTRAKHFVASFDRPNIQYRIEAKNRPEHQLLA
FIQSEHAGDAGIVYCLSRNSVEKTAAFLTANGVEAVPYHAGLDNRTRARNQARFLREDGL
VVVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMVYGLSDVVQQ
RKMIDSSDGDAMHRRQLQLHLDAMLALCETVQCRRVQLLAYFGQQGERCGNCDTCLNAPE
SWDGTVPAQKVLSTVLRLKRERGQSFGAGHIVDILVGKRNPKVEQHAHHELKVFGIGTEL
RDIEWRGVVRQLLAQGLLAVHGDYGVLTLTEASNQVLFEKREVMLRREPERAKAARTPKP
AKASRLAAADLTPSDTGLFEKLRAWRAATAKEQGVPAYVVFHDATLREIATRKPTSMSDL
AGISGIGENKRAKYGEGVLEVVAAESGSPNAGASPASVKAGTASPAAANRGAMAGTEPSS
APPANFGAAEDIPWPDEVPPDFDDLPPDYA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
attgccgtcgtgagcgcgccggaggtcgagacagctgtcgggagcctggtggatgccgga
agtgatccggcacaccaggttttgcgaaagaccttcgggtacgacagttttcgcgggccg
cagcgcgacatcgtcgagcaggtgatctccggcggtgacgcgctggtgctcatgcccacc
ggtggcggcaagtcgctgtgctatcagattccggcgctggtgcggccgggggtgggcgtg
gtggtctcgccgctgatcgcgctcatgcaggatcaggtggacgcgctgcaggcggtcggg
gtgcgcgccgggtttctcaactccacccagttccccgacgaacggcgcacggtcgaggca
caattcgtggccggtgaactggatgtgctctatctcgcgccggagcggttgcggttggag
tccaccgcgcaattgctcgaccgcggcaagatctcggtgttcgccatcgacgaggcgcac
tgtgtgtcgcagtggggccacgacttccggcctgactatctgggcctgtccatgctgcac
gagcgctggccggacgtgccccgcatcgcgctcaccgcgacggcgacggaggcgacccgc
aaggagatcgccgagcggctggatctcacgcgcgcgaaacacttcgtggccagtttcgac
cggcccaatatccagtaccggatcgaggccaagaatcggcccgaacatcaactgctggcg
ttcattcagagcgagcacgccggggacgcgggcatcgtgtactgcctgtcgcggaactcc
gtggagaagaccgcggcgttcctgaccgccaacggcgtggaggcggtgccctatcacgcg
gggctcgacaatcggacccgtgcgcggaatcaggcgcggttcctgcgcgaggacggactg
gtggtggtcgcgaccatcgccttcggcatgggcatcgacaagccggatgtgcggttcgtg
gcgcatctggatctgccgaaatcggtcgagggctactaccaggagaccggtcgcgccgga
cgcgacggcctgccctccaccgcgtggatggtctacggcctcagtgacgttgtgcagcaa
cgcaagatgatcgactcctccgacggtgacgccatgcaccgccggcagttgcagctgcat
ctggacgccatgctcgcgctgtgcgagaccgtgcagtgccggcgcgttcagctgctcgcc
tacttcggtcagcagggcgagcggtgcggcaactgtgacacctgcctcaacgcgcccgaa
tcctgggacggcaccgtgcccgcccagaaggtgctgtccaccgtgctgcggctgaaacgc
gaacgcgggcagagcttcggcgcgggccacattgtcgacatcctcgtcggcaagcgcaat
cccaaggtggagcagcacgcccaccacgagctcaaggtcttcggcatcggcaccgaactg
cgcgatatcgaatggcgcggcgtggtccgccaactcctggcccagggcctgctggccgtc
cacggcgactacggcgtgctgactctcaccgaggccagcaaccaggtcctgttcgagaag
cgcgaagtcatgctccgccgcgaacccgaacgcgccaaggccgcccgaacccccaagccc
gccaaggcctcccgcctcgccgccgccgacctcaccccctccgacaccggcctgttcgaa
aaactccgcgcctggcgcgccgccaccgccaaggaacagggcgtccccgcctacgtcgtc
ttccacgacgccaccctccgagaaatagccacccgcaaacccacctccatgtccgacctg
gccggcatctccggcatcggcgagaacaaacgcgccaaatacggcgaaggcgtcctggaa
gtggttgccgccgaatccggttcgccaaacgctggcgcgtcgcccgcgagcgtgaaggcc
ggaacggcaagtcccgcagcggcgaatagaggtgcgatggcaggaacggagccctcctcc
gctccgcccgccaacttcggtgcagccgaggacattccatggccggacgaagtaccgccg
gacttcgacgacctcccgcccgactatgcgtga
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