KEGG   Nocardia yunnanensis: D7D52_32965
Entry
D7D52_32965       CDS       T09774                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nyu  Nocardia yunnanensis
Pathway
nyu00010  Glycolysis / Gluconeogenesis
nyu00020  Citrate cycle (TCA cycle)
nyu00260  Glycine, serine and threonine metabolism
nyu00280  Valine, leucine and isoleucine degradation
nyu00310  Lysine degradation
nyu00380  Tryptophan metabolism
nyu00620  Pyruvate metabolism
nyu00630  Glyoxylate and dicarboxylate metabolism
nyu00640  Propanoate metabolism
nyu00670  One carbon pool by folate
nyu00785  Lipoic acid metabolism
nyu01100  Metabolic pathways
nyu01110  Biosynthesis of secondary metabolites
nyu01120  Microbial metabolism in diverse environments
nyu01200  Carbon metabolism
nyu01210  2-Oxocarboxylic acid metabolism
nyu01240  Biosynthesis of cofactors
Module
nyu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nyu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nyu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nyu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nyu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    D7D52_32965 (lpdA)
   00020 Citrate cycle (TCA cycle)
    D7D52_32965 (lpdA)
   00620 Pyruvate metabolism
    D7D52_32965 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    D7D52_32965 (lpdA)
   00640 Propanoate metabolism
    D7D52_32965 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    D7D52_32965 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    D7D52_32965 (lpdA)
   00310 Lysine degradation
    D7D52_32965 (lpdA)
   00380 Tryptophan metabolism
    D7D52_32965 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    D7D52_32965 (lpdA)
   00670 One carbon pool by folate
    D7D52_32965 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nyu04147]
    D7D52_32965 (lpdA)
Enzymes [BR:nyu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     D7D52_32965 (lpdA)
Exosome [BR:nyu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   D7D52_32965 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_binding_2 FAD_oxidored HI0933_like GIDA DAO FAD_binding_3 NAD_binding_7 3HCDH_N Lycopene_cycl Lys_Orn_oxgnase
Other DBs
NCBI-ProteinID: AYF77833
UniProt: A0A386ZKM7
LinkDB
Position
complement(7047462..7048919)
AA seq 485 aa
MPEFDLLVIGGGPGGYVAAIRAAQRGLNVGLVEKERPGGVCLNWGCIPTKAMLRSAEVFH
TVAHAADFGIYADNLRFDYAAVRQRKDGIVKELTDGVAGLLKANGVTIIEGHARFTSATT
VEVVEAGPSPIFEGGPRYAAAPTATAVRTVSAKDVIVATGSVPAVLPIPGADLPGVITSD
GAFGLTEVPKRLVVIGGSAVGAEWANLFHEFGADVTVVEMQDRLVPLEDKEIGTALVRSF
TKRGIAVLTGATVTAIAEAGNGLTVTVGGAKPQELPADVVLVGVGRRPNTAELGLDVAGI
DTDARGFIPVDEHLRTGVEHVYAIGDVTGKALLAHVASHQGLVAADTIAGHAAHIDYNVI
PAATFTHPEIASVGLTEDAAKAAGHDIVAAKFPFAALGRAKSFGDQEGFLKIVAGKQHGE
VLGVHIIGPSASDLITEGALAISLEATLDELAETIHAHPTLGEIGMEAALVGLGLPVHVA
PPRKR
NT seq 1458 nt   +upstreamnt  +downstreamnt
gtgccggaattcgatcttctggtgatcggcggcggcccgggcggatatgtggccgccatc
cgcgccgctcagcggggcctgaacgttggcctggtggagaaggaacgcccgggcggggtc
tgcctgaactggggctgcatcccgaccaaggcgatgctgcgttcggccgaggtcttccac
accgtcgcgcatgccgccgacttcggcatctacgccgacaacctgcgcttcgactacgcc
gcggtgcggcagcgcaaggacggcatcgtcaaggagctgaccgatggtgtcgcgggcctg
ctgaaggccaatggcgtcacgatcatcgagggccacgcgcggtttacgagcgccacgacg
gtggaggtcgtcgaggccggtccgtcgccgatcttcgagggcggcccgcgctacgccgcc
gccccgaccgccaccgcggtccgcacggtcagcgccaaggacgtcatcgtcgcgaccggt
tcggtcccggccgtcctcccgatcccgggcgcggacctgcccggcgtgatcacctccgac
ggcgcgttcggcctgaccgaggtgcccaagcgactggtcgtcatcggcggcagcgcggtg
ggcgcggagtgggccaacctgttccacgagttcggcgcggatgtcaccgtggtggagatg
caggatcgcctggttcccttggaggacaaggagatcggcaccgccctggtgcgctcgttc
accaagcgcggcatcgccgtgctgaccggtgcgaccgtcaccgcgatcgcggaggccggc
aacggcctgaccgtcaccgtgggtggcgcgaagccgcaggagctgcccgccgatgtggtg
ctggtcggcgtcggccgccgccccaacaccgccgagctcggcctggacgtcgccggaatc
gacaccgacgcacgcggtttcatcccggtcgacgagcacctgcgcaccggcgtcgagcac
gtctacgccatcggcgacgtcaccggcaaggcgctgctcgcgcacgtcgcctcgcatcag
ggtctggtcgccgccgacaccatcgccggccatgccgcccacatcgactacaacgtcatc
ccggccgcgaccttcacccacccggagatcgcctccgtcggcctgaccgaggatgccgcc
aaggccgccggccacgacatcgtcgccgccaagttcccgttcgcggcgctgggccgggcc
aagtccttcggcgatcaggagggcttcctcaagatcgtcgccggcaagcagcacggcgag
gtgctcggcgtgcatatcatcggcccgtcggccagcgatctcattaccgaaggggccctg
gcgatctcgctggaggcgaccctcgacgagctggccgagaccattcacgcccaccccacc
ctcggcgagatcgggatggaggccgccctggtcgggctgggcctgcccgttcacgtcgcg
ccgccccggaagcgttga

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