Neisseria zalophi: D0T92_01195
Help
Entry
D0T92_01195 CDS
T06266
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nzl
Neisseria zalophi
Brite
KEGG Orthology (KO) [BR:
nzl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzl03016
]
D0T92_01195
Enzymes [BR:
nzl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
D0T92_01195
Transfer RNA biogenesis [BR:
nzl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D0T92_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QEY25290
UniProt:
A0A5J6PX16
LinkDB
All DBs
Position
267225..269099
Genome browser
AA seq
624 aa
AA seq
DB search
MNIFYEESGQFKVAAVVQKNDTNYQADTMHGKRTKVKAANVFVEFDTPAEDFFTKAQSEA
AEIDTDLLWEVCSDTEFTAEAIAEEYFGHTPTKIELAATLIALYSAPVYFYKKGKGVFKA
APEETLKQALAAIERKKQQEAQIESWAERLQQGKMPPEIAADLKTILHAPDKQALTYKAF
TKAAGAMKSTPLALAMQTGAVQSIPQYLYDGFEVKHFPQGTGFPHIDIPAYTPLPQADVQ
AFSIDDDSTTEVDDALSVTDLGNGSKRIGIHIAAPSLAVTPGSDIEKIIMARLSTVYFPG
GKITMLPENWIAGFSLDAGAHRPAISIYFDVDSEFNISAPTHKIEAVYISENLRIQAIEP
HFNAQTGLDAEGRVMFNHHQDLIWLHQFAIARQKTRGKYDPERPPQYDYSIELNDDGHVA
VARRERGSPIDTLVSEMMILANSTWAEMLDQNDLPGLFRVQPGNSKVRMSTQSEPHSGMG
VQHYGWFTSPLRRAADYINQKQLISLIDENAEPLFHNNDAELFSALRNFDTTYTAYADFQ
RQMESYWSLVYIRQENLKELSATLLKEDLVRINGLPLVVRATGIPFDALPKSQLLLAVTE
VDTDKQFIALNYLKAVAPSALPVN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaacatattttacgaagaatccggccagttcaaagtggctgctgtcgttcaaaaaaac
gataccaactaccaagccgacaccatgcacggcaagcgtaccaaagtgaaagcggccaat
gtattcgtcgaattcgacacaccggcggaagattttttcactaaagcccaaagtgaagcc
gccgaaatcgacactgatttactctgggaagtatgcagcgacacagaattcaccgccgaa
gcaattgccgaagaatatttcggccacacaccgaccaaaatcgaattggcggctacttta
atcgccctatattccgcccccgtatatttctataaaaaaggcaaaggcgtattcaaagcc
gcgcccgaagaaaccctcaagcaggcattggccgctatcgaacgcaaaaaacagcaggaa
gcacaaatcgaaagctgggcggagcgtttgcaacagggcaagatgccccctgaaattgcc
gccgatttaaaaaccatcctacacgcgcccgacaaacaggcactaacctataaagccttt
accaaagcagcgggtgccatgaaatcgacaccgctggcattggccatgcaaaccggcgcg
gttcaatcgattccccaatatctttacgacggtttcgaagtcaaacactttccgcaaggc
acgggctttccccatatcgacatacccgcctacacaccgctgccgcaagccgacgtacag
gcattttccatcgacgacgacagcaccaccgaagtcgacgatgccttgagcgttaccgac
ttaggcaacggcagcaaacgcatcggcatccacattgccgcaccgtcgctcgccgtcact
cccggcagcgatatcgaaaaaatcattatggcacgcctgagcactgtttatttccccggt
ggcaaaatcaccatgctgccggaaaactggattgccggattcagccttgatgccggcgca
caccgccccgctatcagcatctattttgatgtggacagcgaattcaatatcagcgcaccc
acccacaaaatcgaagccgtttatattagcgaaaacctgcgtattcaagccattgaaccg
catttcaatgcccaaacagggctggatgccgaaggccgcgtcatgttcaaccaccatcaa
gatttaatctggttgcaccaattcgccattgcccgtcaaaaaacacgcggcaaatacgat
cccgaacggcctccgcaatacgattacagcatagaactcaacgacgacggccacgttgcc
gttgcccgccgcgaacgtggttcacctatcgatactttagtgagcgaaatgatgattctc
gccaacagcacttgggcggaaatgcttgaccaaaacgacctgcccgggctgttccgcgtg
cagcccggcaacagcaaagtacgcatgagcacccaatccgaaccgcatagcggcatgggc
gttcagcattatggctggtttacctcgccattgcgccgcgccgccgactacatcaatcaa
aaacaactcatcagcctgattgatgaaaatgccgagcctttgtttcacaacaacgatgcc
gagctcttcagcgcgctacgcaattttgataccacctataccgcttatgccgatttccaa
cgccagatggaaagctactggagcttagtgtatatccggcaggaaaacctcaaagaactc
agcgccaccctgttgaaagaagatttagtgcgtatcaacggattgccgctagtcgtacgc
gccaccggcatcccttttgacgcattgccgaaatcccaactattgctggcggtgaccgaa
gtggacaccgataaacaatttattgcattaaactacttgaaagccgtcgcaccgtcggct
ttgccggtgaattaa
DBGET
integrated database retrieval system
