Neisseria zalophi: D0T92_02630
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Entry
D0T92_02630 CDS
T06266
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nzl
Neisseria zalophi
Pathway
nzl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nzl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D0T92_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nzl03019
]
D0T92_02630
Enzymes [BR:
nzl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D0T92_02630
Messenger RNA biogenesis [BR:
nzl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D0T92_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QEY25538
UniProt:
A0A5J6PRZ4
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All DBs
Position
575552..576943
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AA seq
463 aa
AA seq
DB search
MTQTFTSLGLGSEIIAALTEQGYETPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLP
SLERLKRYATPSTSPAMHPVRMLVLTPTRELADQIDQNVQNYIKNLPLRHTVLFGGVNMD
KQTADLRAGSEIVVATVGRLLDHVKQKNLNFSKVEIVVLDEADRMLDMGFIDDIRKIMQM
LPKQRQTLLFSATFSPPIRKLAQDFMSSPELIEVAAQNTANANVEQHVIAVDTMRKRNLL
ERLILDLDMNQVIVFCKTKQSVDQVTRDLKRREIAAQAIHGDKSQQNRLETLSAFKEGSL
RVLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDQYEQKM
FEAIKTLTGSTIDIERIEGFEPTWWQNGSSVVEVGKGTSVEKRGTQREVRNKEHKKNNRN
EQPRLSDRNNDPSAACGKIAGRSRRSRRERQPCALLQPDYGAQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacttttacatcactcggtttaggcagtgaaattattgccgcattaaccgag
caaggctatgaaacgcctacccccattcaggccgccgccatccccaaagctttggcaggc
catgatctcttggccgccgcccaaaccggcacaggcaaaactgccgcttttatgttgccg
agccttgagcggttaaaacgttatgcgacccccagcacgtctccggccatgcatccggtg
cgtatgttggtattgaccccgacccgcgagctggccgaccagattgatcaaaacgtacaa
aactatattaaaaacctaccgctgcgccataccgtgctgttcggcggagttaatatggat
aagcaaacggctgatcttcgtgccggcagtgaaattgtggttgctaccgtcggtcgcctg
cttgatcatgtcaaacaaaaaaacctgaatttcagtaaagttgaaattgtcgtgcttgac
gaagcagaccgcatgttggatatgggttttatcgacgatatccgcaaaatcatgcagatg
ctgcccaaacaacgccaaaccctactgttttccgctaccttttccccgcctatccgcaag
ctggctcaagattttatgagcagtcccgaattgatagaggttgcggcgcaaaatacggcc
aatgccaatgtcgagcaacatgtgattgccgtagataccatgcgtaagcgcaatttactc
gaacgcctgattctggatttggatatgaaccaagtgattgtgttttgtaaaaccaaacaa
agcgtcgatcaggtcacccgtgatctcaagcgcagagaaattgccgcccaagccattcat
ggcgataaatcacaacaaaaccgcttagaaaccctgagcgcatttaaagagggcagtctg
cgcgtgttggtggctaccgacgtggccgcacgcggcttggatattgccgaattacctttt
gtgattaactacgagctgccgacgcagccggaagactatgttcaccgtatcggtcggaca
gggcgtgccggtgccgatggtgtggccatttctttaatggatcaatacgaacaaaaaatg
tttgaagccattaaaacgcttacgggcagcactatagatatcgagcgtatagaaggattc
gaaccgacttggtggcaaaatggcagcagtgttgtggaggttggtaaaggtacttcggtt
gaaaagcgcggtacacaacgagaagtgcgcaataaagagcacaagaaaaacaatcgtaat
gagcagccgcgtttatctgatcggaataatgatcctagtgcagcttgcggcaaaattgcg
gggcgttcacgtcgcagtagaagagaacgacagccttgtgctttattgcaacctgattat
ggagctcaatga
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