Neisseria zalophi: D0T92_03730
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Entry
D0T92_03730 CDS
T06266
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
nzl
Neisseria zalophi
Pathway
nzl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nzl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D0T92_03730 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzl03021
]
D0T92_03730 (rpoD)
Transcription machinery [BR:
nzl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0T92_03730 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
SPO22
GTP_EFTU
DRC7_C
Motif
Other DBs
NCBI-ProteinID:
QEY25731
UniProt:
A0A5J6PSM5
LinkDB
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Position
complement(806937..808913)
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AA seq
658 aa
AA seq
DB search
MSNQNTDNRDNEYEEQDDSRPLTLEEQRARLRQLIIMGKERGYITYSEINDALPDDMSDA
EQIDNIVSMIAGLGIQVTEQAPDAEEMLMSDNTAAITDDDAVAEAEAALSSVDSEFGRTT
DPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSIAEILELIQRIREDE
IKVDEVVEAIIDPNEVLLNELGLGHLETASSSSTADSNVSDDDDSDDSDDDSDDEEEEES
AEAIAATNLAELRQKVLDHFDLIQADYDKMIAALSKHDSRHEDYLKYRDAIASKLLEVRF
GTRQIESLSNSLREKVDNIRKMEREIRDICLDRVHMDRDYFIHYFLPQITNLNWVEEEIA
KGKVWSDALDRFRHAIVEKQTALAEMETETRISIEELKEINKNMVISEKETAAAKQEMIQ
ANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITR
SIADQARTIRIPVHMIETINKMNRISRQYLQENGEDPDSAKLAELMEMPEDKIRKIMKIA
KEPISMETPIGDDDDSHLGDFIEDLNNIAPADAAMYSSLHEVTKEVLESLTPREAKVLRM
RFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDRLKSFLDSEENKQP
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaaatactgataaccgcgataacgaatatgaagagcaagacgattcccgc
ccgctgaccctcgaagaacagcgggcccgtttacgtcagctcattattatgggtaaagag
cgcggctatattacctattcagaaattaacgatgccttacccgacgatatgtcggatgcc
gaacaaatcgacaatattgtcagcatgattgccggcttgggcatccaagtgaccgaacag
gcgcccgatgctgaagaaatgctgatgagcgacaacaccgccgccattaccgacgacgat
gccgttgccgaagccgaagccgccttatccagcgtagacagcgaattcggccgcaccacc
gaccccgtgcgtatgtatatgcgcgaaatgggacaggttgacctgctcacgcgcgaagac
gaaatcattatcgccaaaaaaatcgaaaatgccctgaaaaacatggttcaggccatttcc
gcctgcccgggatcaattgccgaaatcctcgaactcatccaacgcatccgtgaagatgaa
atcaaggttgacgaagtggtcgaagccattattgatcctaatgaagttttactgaatgaa
ttgggattaggacacttggaaaccgcgtcgtcctcctcaactgccgacagcaatgtttcc
gatgatgacgatagcgacgacagcgatgatgacagcgacgatgaagaggaagaagaaagc
gccgaagccatcgccgcaaccaatcttgccgaattaaggcaaaaagtattggatcacttt
gaccttatccaagcagactacgacaaaatgattgccgcactgtccaaacacgacagccgc
catgaagactacctcaaataccgcgatgccattgcatccaaactattggaagtacgcttc
ggcacacgccaaatcgaaagcctgagcaacagcctgcgtgaaaaagtggacaatatccgc
aaaatggagcgtgaaatacgtgatatctgcttagaccgcgtccacatggatagagactat
ttcatccactacttcttaccgcaaatcaccaatctaaattgggttgaagaagaaattgcc
aaaggcaaagtatggagcgatgctctcgaccgtttccgccatgccattgttgaaaaacaa
accgcacttgccgaaatggaaactgaaacccgcatttccattgaagaactgaaagaaatc
aataaaaacatggtcatcagcgaaaaagaaaccgctgctgccaaacaagaaatgattcag
gccaacctgcgtctggtaatttctattgccaagaaatacaccaaccgcggcctgcaattc
ctagacttgattcaagaaggcaatatcggcctgatgaaagcggtagataaattcgaatac
cgccgcggctataagttttcaacctatgccacttggtggatacgccaagccattacccgc
tcgattgccgaccaagcacgtaccatccgtattccggttcacatgattgaaaccatcaat
aaaatgaaccgtatttcgcgccagtatctgcaagaaaacggagaggatcccgattctgcc
aaattggccgaactgatggaaatgcccgaagataaaatccgcaaaatcatgaaaatcgct
aaagagccgatttcgatggaaacccctatcggcgatgacgacgattcgcatttgggcgac
tttatcgaagacctcaacaatattgcgccggcagatgccgcgatgtattccagcctgcac
gaagtaaccaaagaagtgctggaaagcctaacaccgcgtgaagccaaagtattgcgtatg
cgcttcggtattgatatgaataccgaccacacgcttgaggaagttggcaaacagttcgac
gtaacccgcgaacgtattcgccaaatcgaagccaaagccttgcgcaaacttcgccatccg
acccgaagcgaccgcctgaaaagcttcttagacagcgaagaaaacaaacagccctaa
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