Neisseria zalophi: D0T92_05750
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Entry
D0T92_05750 CDS
T06266
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nzl
Neisseria zalophi
Pathway
nzl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nzl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0T92_05750 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nzl03400
]
D0T92_05750 (recB)
Enzymes [BR:
nzl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D0T92_05750 (recB)
DNA repair and recombination proteins [BR:
nzl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0T92_05750 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
SLFN-g3_helicase
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEY26084
UniProt:
A0A5J6PV16
LinkDB
All DBs
Position
complement(1242188..1245823)
Genome browser
AA seq
1211 aa
AA seq
DB search
MQPFHPLNVPIQGTNLVEASAGTGKTYGIAALFTRLIVLEKMSVESVLVVTFTKAATAEL
KNRLRARLDNVLLALEKTDNASGSDGLREYCAKHHDGDVFLLELLQKALAQESRQRLIVR
LKAAIGRFDNAAIYTIHGFCQRLLRDYAFLCQVPFDLTLSEETHERMLIAAQDFWRQEVA
DSPLFAPLVFKHHETPQTALNHIRTFIGRPYLKFRRPEINLASEYQALQTIWQATRPKLA
EYAETFWRIHPALNGNSYRKNTFEKLFANLQKADAGDTIPSYHEKLPMLATQALTEKTKK
GKAVNDEAYQSLNHLALLGEAIQKYEQSEQDALTALHLDLLEYVRKALSEDKQNRRERSF
DDLLLDVHHALTQNPKREQLAQAVAANWKTALIDEFQDTDPLQYEIFSRLFIRQGNPLFL
VGDPKQAIYSFRGADIYAYLQAARDADAHYTLDTNFRSHADLIHGIGAIFQQKNQPFVLN
GIGYTDVKANREAGRLNDTEAPIKIRWINQTDDDSANKNMLRQRAAAYCADEIAHALNEA
AANRLTYRKNSNSDAVPIQSGQIAVLVRTHNEGSMIAAALKKRRIQSVLLHRESVFASPE
AEAIAALIGFWLQPQRTEPLRFVLSGVLFRQTATELYTLNHDEAALLAWIASAQTAADIW
QQSGVYAAMQYFSAQHSIETHLLAQHNERSLTNYHQIIERLAEEDEQSRSPAALHQWLLT
EIQTAHEGGAAGDSNLLRLESDENLVKIVTMHAAKGLQYPLVYCPFVWDAPARYNDSWQI
LHCNGDSELLAQHQRSDADNDKIADENLSESLRLLYVALTRAEEQLVIYAGYCNDTRFNT
FAYLLAGSSDTNRSQAEEIYAKAKKTGKAAAEMAELKTNWQRFLETSPQAASFAFLETPP
QAAVYTNGNISDGHYQALAIPPRSFELIRHTSFTGLSRHTLSHNDDAREELQPAIDAAES
GMADLPDFQTAEPADGNDIYHFPRGAEAGICLHEILENFDFAAPAAEQQEAVSHVLDRYG
FDPIWLPAVENMLDHTRLTPLGNGSQNSLAVIPPERRLAEMGFTLYLNDFPLKPLQAWFA
DARTGLSAACIQASQLLDFQDVKGFLNGFIDMTCQDSDGLVTVIDYKSNHLGYNAADYTP
EAMDEAVAHHHYYLQALIYAIAVARHFQSRGQPLPRISVRYLFLRGLDGSGNGIWSWDID
SDWLSAWVPSS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctttccatcctctcaatgtgcccattcagggcaccaatcttgtggaagcctct
gccggtaccggtaaaacctacggtattgccgcattattcacccgcctgattgtgctggaa
aaaatgtcggtagaaagcgtattggtcgttacctttaccaaagcggcgaccgccgaattg
aaaaaccgtttgcgggcgcgtttggataatgttttattggcattggaaaaaacagataat
gcaagcggttcagacggcctgcgtgagtattgtgccaagcatcatgacggcgatgtgttt
ctgcttgaactactgcaaaaagcgttggcacaagaaagccggcaacggctgattgtgcgc
ctaaaagccgccatcggcaggtttgataatgccgctatctataccatacacggtttctgc
caaaggctgctgcgcgattatgcctttctctgccaagtgccttttgatttaacactttcc
gaagaaacccacgaacgtatgctgattgccgcgcaagatttttggcggcaggaagttgcc
gatagccccttattcgcgcctttggtattcaaacaccatgaaacgccgcaaaccgcttta
aaccatatccgaacctttatcggccgcccctatctcaaattcagacggcctgaaatcaat
ttggctagcgaatatcaggcactgcaaaccatttggcaagccacccgacccaagctggca
gaatatgccgaaaccttttggcgcatacaccctgctttaaacggcaacagctaccgcaaa
aatacatttgaaaaactgtttgccaacctgcaaaaagccgacgccggcgatacgataccg
tcctatcatgaaaagctacccatgcttgccactcaggccttaaccgaaaaaaccaaaaag
ggcaaagcggttaacgatgaagcataccaaagcttaaaccatctggcgcttttaggcgaa
gccattcaaaaatacgaacaaagcgagcaagacgcgctcaccgcacttcatttggatttg
cttgaatatgtgcgcaaagcattaagcgaagacaaacaaaaccgccgcgaacgcagcttc
gacgatttattattggatgttcaccacgccctcacccaaaacccgaaacgcgagcaattg
gcgcaagccgttgccgccaattggaaaaccgcactcatcgacgaattccaagacaccgac
ccgctgcaatacgaaattttcagccgcctgtttatccggcagggcaatcccctgtttttg
gtcggcgaccccaaacaggcgatttacagctttcgcggtgccgatatttatgcctatctg
caagccgcccgcgatgccgacgcccactatacccttgacaccaacttccgcagccatgcc
gatttaattcacggtatcggcgccatattccaacaaaaaaaccaacctttcgtgttaaac
ggcatcggctataccgatgtcaaagccaaccgtgaggcaggccgtctgaacgataccgaa
gcaccgataaagatacgctggattaatcagaccgatgacgattccgccaataaaaatatg
ttgcgccaacgcgccgctgcctattgcgccgacgaaatcgcacacgccctcaacgaagcg
gcagccaaccgcctgacctatcggaaaaacagcaacagcgacgccgtaccgattcaatcc
gggcagattgccgtattggtacgcacccacaacgaaggcagtatgattgccgccgcactg
aaaaagcgccgcatccaaagcgttttgctccaccgcgaatcggtttttgcttcgcccgaa
gccgaagccatagccgcccttatcggtttctggctgcaaccgcagcgtaccgagccttta
agatttgttctcagcggcgtattgttccgtcaaaccgctaccgaactgtataccctcaac
catgacgaagccgccttattggcatggatagcctccgcacaaaccgccgccgatatttgg
caacaatccggcgtttatgccgccatgcagtatttttccgcacaacacagcattgaaacg
cacctattggcacaacacaacgaacgcagcctcaccaactaccatcaaatcatcgaaagg
ctggcggaagaagacgaacaaagccgcagccctgccgccctacaccaatggctgctcaca
gaaattcagacggcacacgaaggcggtgcagcgggcgacagcaacctactcagattggaa
agcgatgaaaacctcgtcaaaatcgtaaccatgcacgcagccaaaggtttgcaatatccg
ttggtttattgcccgtttgtgtgggatgcccccgccagatacaacgacagctggcaaatt
cttcactgcaacggggatagcgaattattggcccaacaccagcgcagcgatgccgacaac
gacaagattgccgatgaaaacctcagcgaaagcctacgcctgctttatgtagcgctcacc
cgcgccgaagagcaactggttatctatgccggctattgcaacgacacccgttttaacacc
ttcgcctatctgctggccggaagctccgacaccaaccgcagtcaggccgaagaaatttat
gccaaagccaaaaaaaccggcaaagccgccgccgaaatggccgagctcaaaaccaactgg
cagcgttttctggaaacatcgccgcaagccgcaagctttgcttttctcgaaacaccgccc
caagcagccgtttatacgaacggcaatatttcagacggccattatcaggcactcgccatt
ccgccgcgttcgttcgaactcatccgccacaccagctttaccggcctgagccgccacacc
ctcagccacaacgacgacgcccgcgaagagttgcaaccggccattgacgccgccgaaagc
ggtatggcggatttacccgactttcagacggccgagccggccgacggcaacgatatctat
cattttccacgcggcgccgaagccggcatctgtttgcatgaaatattagaaaactttgat
ttcgccgcgcccgccgccgagcaacaagaagcggtttcccatgtactcgaccgctacggc
tttgacccaatatggctgcccgccgtggaaaatatgctcgaccatacccgcctcaccccg
ttaggtaacggcagtcaaaatagcttggccgtcataccgcccgagcgccgtttggccgaa
atgggctttacattatatttaaacgatttccccctcaagcccttgcaggcatggtttgcc
gatgcccgaaccggcttatcggcagcctgtatccaagcttcgcaactgctcgattttcaa
gatgtgaaaggcttcttaaacggctttatcgatatgacctgccaagattcagacggcctc
gttaccgttatcgactataaatccaaccatttgggttacaacgccgccgactacaccccc
gaagcgatggacgaagccgttgcccaccaccattattatttacaggcactcatttacgcc
attgccgtcgcccgccatttccaatcccgcggccaacccctgccccgcatttccgtgcgc
tatctgtttttgcgcggattagacggcagcggcaatggcatttggtcttgggatatcgat
agcgattggctgtcggcatgggtgccgtcgtcgtga
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