Neisseria zoodegmatis: SAMEA4504057_0629
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Entry
SAMEA4504057_0629 CDS
T06683
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nzo
Neisseria zoodegmatis
Pathway
nzo03030
DNA replication
nzo03430
Mismatch repair
nzo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4504057_0629 (dnaE)
03430 Mismatch repair
SAMEA4504057_0629 (dnaE)
03440 Homologous recombination
SAMEA4504057_0629 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nzo03032
]
SAMEA4504057_0629 (dnaE)
03400 DNA repair and recombination proteins [BR:
nzo03400
]
SAMEA4504057_0629 (dnaE)
Enzymes [BR:
nzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4504057_0629 (dnaE)
DNA replication proteins [BR:
nzo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4504057_0629 (dnaE)
DNA repair and recombination proteins [BR:
nzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4504057_0629 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
SNU79142
UniProt:
A0AB38DP91
LinkDB
All DBs
Position
1:complement(693436..696870)
Genome browser
AA seq
1144 aa
AA seq
DB search
MTDPIYIPLRLHTEFSITDGTVRIKDAVKKAVSDGLPALGISDLMNTFGLVKFYKACRGA
GIKPVAAADVWIENPAAPDKPFRAMLIVKNDSGYLRLSELLTAAYVGKDRNVDHAELRQA
WLAEGDNSGLICLSGAHYGEVGVNLINGHPDAAKAAAQKYAAWFPNAFYLELQRLPERPQ
WETSVSGSLEIAAELDLPVVATHPTQFLNQEDFSAHEARVCIAGGWVLADKKRPHEFTPS
QYFASPEQMAERFADLPEALQNTVEIAKRCNLTLTLGKNFLPLFPTPDGMSLDDYLTQLS
NEGLQERMVQLYPDEAERAEKMPEYQARLDFELGIIIQMGFPGYFLIVQDFINWAKNNGC
PVGPGRGSGAGSLVAYALKITDLDPLKYALLFERFLNPERVSMPDFDIDFCQSNRGRVIE
YVREKYGADAVSQIVTFGTMSSKAVIRDVGRVLELPFGLCDRLSKLIPLEANRPVSLEKA
MEMEPEIRQLIEEEGAEELMTLAQKLEDLTRGLGMHAGGVLIAPGKISDFSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQENIKNTVGEEIDVNTIPLDDQAAYKI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQAFE
YIHPLLEPVLEPTYGIMVYQEQVMQAAQVIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AKGAEEKAISRKKADEIFDYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDARANGIEFLPPDINESDYLFTPNNRKQIRYALGAIKGTGEGAVA
SIMEARKQGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN
NADQKAANANQGGLFDMMEDAIAAIELQAAPAWSESEKLAEEKTVIGFYLSGHPFGPYAQ
EVRQIAPTRLSRLKPQDNVRVAGFTTAVRTMMGKRGKIAFATLEDQSDQVEVMITGPVLE
ESAGRLKADQVLIMECKVSRDDYTGGDTLRIVANQVMALQTARERYARSLSLSLKPEHDI
PALAQLLNTHRRPDTGHIPISLSYANAAACGDLKIPPKWTVTPSAELFDKLETLLGGRSV
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccatctacatccccctgcgtctgcacaccgaattttcgattaccgacggc
acggtacgcatcaaagatgccgtgaaaaaagccgtttcagacggcctgcccgcactgggc
ataagcgacctgatgaatactttcggcttggtaaaattctacaaagcctgccgcggcgca
ggcatcaaaccggtggcggcggcggacgtgtggatcgaaaaccccgctgcgcccgacaaa
cctttccgcgccatgttgattgtaaaaaacgacagcggctacctgcgcctgagcgaactg
ctcaccgccgcctatgtgggcaaagaccgcaacgtcgatcatgccgaactgcggcaggcg
tggctggccgaaggcgacaacagtggcctgatttgcttatcgggtgcgcattacggcgaa
gtgggtgtcaacctgatcaacggtcaccccgacgcagccaaagcggcggcgcagaaatac
gcggcgtggtttcccaatgcgttttacctcgaactgcaacgcctgcccgaacgcccgcaa
tgggaaacttcggtatccggcagcttggaaatcgccgcggaattggatttgcccgtagtc
gccacccatccgacccagtttctcaaccaagaagacttcagcgcccacgaagcgcgggtg
tgcattgccggcggctgggtactggccgacaaaaaacgcccgcacgaattcacgccgagc
caatatttcgcctcgccggagcagatggcggagcgtttcgccgatctgcccgaagcgttg
caaaacacggtggaaatcgccaaacgctgtaatctcacgctcacgctgggcaaaaacttt
ttgccgctgttccccacgcccgatggcatgtcgctcgacgactacctgacccaactttcc
aacgaaggtttgcaagagcgcatggtgcagctttaccccgacgaagcggaacgcgccgaa
aaaatgcccgaatatcaggcacgcttggattttgaattgggcatcatcatccaaatgggc
tttccgggctacttcctcatcgtacaagacttcatcaactgggcgaaaaacaacggctgc
ccggtggggccggggcgcggttcgggtgcaggctcgctggtggcctatgcgctgaaaatc
accgacctcgacccgttgaaatacgcgctgctgttcgagcggttcttaaaccccgagcgc
gtttccatgcccgacttcgatatcgacttctgccaaagcaaccgcggccgcgtgattgaa
tatgtgcgcgaaaaatacggtgccgatgccgtgagccaaatcgttaccttcggcaccatg
tcgtccaaagccgtcatccgcgacgtgggccgtgtgttggaattgccgttcggcctgtgc
gaccgcttgtcgaaactgattccgctcgaagccaaccgccccgtgagccttgaaaaagcg
atggaaatggagccggaaatccgccagctgatcgaagaagaaggcgcggaagagttgatg
acgctggcgcaaaagctggaagacctcacccgcggcctcggcatgcacgcaggcggcgtg
ttgattgcgccgggcaaaatttccgacttcagccccgtgtatcaggccgacgaatcagcc
tcgcccgtgtcgatgtacgacaaaggcgacgtggaagacgtgggcttggtgaagttcgac
ttcttgggcttgcgcaaccttaccattatcgaaatggcgcaggaaaacattaaaaacacc
gtcggtgaagaaatcgacgtgaacaccattccgctcgacgaccaagccgcctacaaaatt
ttccgcgatgccaacaccaccgccgttttccagtttgaatcgaccggcatgaaaaaaatg
ctgaaaacggcgcacaccaccaagtttgaagagttgattgccttcgtatcgctttaccgc
cccggcccgatggacaacattcccgatttcgtcgcccgcatgaaggggcaggcgtttgaa
tacatccatccgctgctggagccggtgttggagccgacttacggcatcatggtttaccaa
gaacaggtgatgcaggccgcgcaggtgatcggcggctactcgctcggcggtgcggacttg
ctgcgccgcgccatgggtaagaaaaaacccgaagaaatggtgaaacaccgcgaaattttc
gccaaaggcgcggaagaaaaagccatttcccgcaaaaaagccgatgaaattttcgactac
atggaaaaattcgccggctacggcttcaacaaatcgcacgccgccgcctacgcgctgatt
tcctaccaaaccgcctggctgaaagcgcattatcccgccgaattcatggccgcaaccatg
tcgagcgagttggacaacaccgaccagctcaaacacttctacgacgacgcgcgcgccaac
ggcatcgaatttctgccgcccgacatcaacgaatcggattacctgtttacccccaacaac
cgcaaacaaatccgctatgccctcggcgccatcaaaggcaccggcgaaggtgcggtagcc
tccatcatggaagcacgcaaacagggcggcaaattcaccgggctgctcgatttctgcgaa
cgcgtcggcaaagaacacatgaaccgccgcaccctcgaagccctgatacgcggcggcgcg
ttcgacagcatcgagcccaaccgcgccatgctgctcgccaacatcgacctggccatgaac
aacgccgaccaaaaagccgccaatgccaatcagggcgggctgttcgacatgatggaagat
gccatcgccgccatcgaactgcaagccgcacccgcatggagcgaatcggaaaagctcgcc
gaagaaaaaaccgttatcggcttctacctatccggccaccccttcggcccctacgctcaa
gaagtgcgccaaatcgcccccacccgcctaagccgtctgaaaccgcaagacaacgtgcgc
gtggccggcttcaccaccgccgtgcgcaccatgatgggcaaacgcggcaaaatcgccttc
gccacgctcgaagaccaaagcgaccaagtagaagtgatgattaccggccccgtgctggaa
gaaagcgcaggccgtctgaaagccgaccaagtgctgattatggaatgcaaagtcagccgc
gacgactacaccggcggcgacaccctgcgtatcgttgccaaccaagtgatggcgctgcaa
accgcccgcgaacgctacgcccgcagcctgagcctgagcctgaaacccgaacacgacatc
cccgctttggcacaactgctgaacacccaccgccgccccgataccggccatatccccatc
agcctttcctacgccaacgccgctgcctgcggcgatttgaagattccgcccaaatggacg
gtaacgccgagcgcggaacttttcgacaagctggaaaccttgttggggggacgctccgtg
cgggtgaattggtaa
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