KEGG   Neisseria zoodegmatis: SAMEA4504057_0882
Entry
SAMEA4504057_0882 CDS       T06683                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenase complexes)
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nzo  Neisseria zoodegmatis
Pathway
nzo00010  Glycolysis / Gluconeogenesis
nzo00020  Citrate cycle (TCA cycle)
nzo00260  Glycine, serine and threonine metabolism
nzo00280  Valine, leucine and isoleucine degradation
nzo00310  Lysine degradation
nzo00380  Tryptophan metabolism
nzo00620  Pyruvate metabolism
nzo00630  Glyoxylate and dicarboxylate metabolism
nzo00640  Propanoate metabolism
nzo00670  One carbon pool by folate
nzo00785  Lipoic acid metabolism
nzo01100  Metabolic pathways
nzo01110  Biosynthesis of secondary metabolites
nzo01120  Microbial metabolism in diverse environments
nzo01200  Carbon metabolism
nzo01210  2-Oxocarboxylic acid metabolism
nzo01240  Biosynthesis of cofactors
Module
nzo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nzo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nzo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nzo_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nzo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SAMEA4504057_0882 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SAMEA4504057_0882 (lpdA)
   00620 Pyruvate metabolism
    SAMEA4504057_0882 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SAMEA4504057_0882 (lpdA)
   00640 Propanoate metabolism
    SAMEA4504057_0882 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SAMEA4504057_0882 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SAMEA4504057_0882 (lpdA)
   00310 Lysine degradation
    SAMEA4504057_0882 (lpdA)
   00380 Tryptophan metabolism
    SAMEA4504057_0882 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SAMEA4504057_0882 (lpdA)
   00670 One carbon pool by folate
    SAMEA4504057_0882 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nzo04147]
    SAMEA4504057_0882 (lpdA)
Enzymes [BR:nzo01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SAMEA4504057_0882 (lpdA)
Exosome [BR:nzo04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SAMEA4504057_0882 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored Thi4 GIDA FAD_binding_2 HI0933_like NAD_binding_8 Pyr_redox_3 Biotin_lipoyl_2 DAO FAD_binding_3 GCV_H ANAPC4_WD40 AlaDh_PNT_C
Other DBs
NCBI-ProteinID: SNU79383
UniProt: A0AB38DPR2
LinkDB
Position
1:968331..970112
AA seq 593 aa
MSLIELKVPDIGGHENVDIIAVEIKAGDTVALEDTLVTLETDKATMDVPAEAAGVVKEVK
VKVGDKISEGGVIAVIEAAGAAAEAPKAESAPAPVKEEAPKAAAPAPQAAQFSGSADAEY
DVVVLGGGPGGYSAAFAAADEGLKVAIVERYATLGGVCLNVGCIPSKALLHNAAVIDEVR
HLAENGIKYPEPELDIDMLRAYKEKVIGKLTGGLAGMAKMRKVDVIRGNGQFVGPNHMEV
ALTSGEGKEETGEKKTVAFKNAIIAAGSRVVNLPFIPEDPRIIDSTGALALKEVPGKMLI
IGGGIIGLEMGTVYSTLGTRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTV
AVEPKEDGIYVTFEGANAPKEPQRYDTVLVAAGRAPNGKLIGAEKAGVAVTDRGFIEVDK
QQRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAYFDARVIPGVAYTAPEVAW
VGVTETSAKEHGIKITKANFPWAASGRAIANGCDQGFTKLIFDAESGKIIGGGIVGPNGG
DMIGEICLAIEMGCDAADIGKTIHPHPTLGESIGMAAEVALGTCTDLPPQRKK
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgagcttgattgaactcaaggttcccgatatcggcggccacgaaaacgtggatatcatc
gccgtggaaatcaaagcaggcgataccgtggcgcttgaagatacgttggttactttggaa
accgacaaagcgactatggacgtacccgccgaagctgccggcgtggttaaagaagtaaaa
gtcaaagtaggcgacaaaatttccgaaggcggcgtgattgccgtgattgaagccgccggt
gccgcagctgaagcaccgaaagccgaatcagcccctgcgcccgtgaaagaagaagcgccc
aaagcggctgcgcccgcaccgcaagccgcccaattcagcggttctgccgatgccgaatac
gacgtagtggtgttgggcggcggcccgggcggttactctgctgcttttgccgcagcagat
gaaggtttgaaagtggctattgtcgaacgctacgctactttgggcggtgtgtgtctgaac
gtgggctgtattccttccaaagccttgctgcacaacgccgctgtgattgacgaagtgcgt
catttggctgagaacggcatcaaatatcccgagcctgagctggatatcgacatgctgcgc
gcctacaaagaaaaagtgatcggcaagctgaccggcggtttggccggtatggctaaaatg
cgtaaagtggatgttatccgcggtaacggacagtttgtcggcccgaaccatatggaagtg
gccttgacttccggcgaaggtaaagaagaaaccggcgagaagaaaaccgttgcattcaaa
aacgccatcatcgcagcgggcagccgcgtggtgaacctgccgtttattcctgaagacccg
cgcatcatcgactctaccggtgcgctggccttgaaagaagtgccgggcaaaatgctgatt
atcggcggcggtattatcggtttggaaatgggtacggtgtacagcacgctgggtacgcgc
ttggacgttgtggaaatgatggacggcttgatgcagggtgccgaccgtgatttggttaaa
gtgtggcaaaagcaaaacgaataccgtttcgacaatattatggtcaacaccaaaaccgtt
gccgttgagccgaaagaagacggtatttacgttacttttgaaggtgccaacgcgcccaaa
gagccgcaacgctacgataccgtattggttgccgcaggccgtgcgcctaacggtaagctg
atcggtgccgaaaaagccggtgttgccgtaaccgaccgcggctttatcgaagtggacaag
cagcagcgtaccaatgtgccgcacatttacgccatcggcgatatcgtcggccagcccatg
ttggcgcataaagccgtgcacgaaggccatgttgccgctgaaaactgtgcaggccataaa
gcctatttcgatgcacgcgtgattccgggtgtagcctacaccgcgcccgaagtggcttgg
gtgggtgtaaccgaaacttctgccaaagagcacggcattaaaatcactaaagccaatttc
ccatgggcggcttcgggtcgtgcgattgccaacggttgcgaccaaggctttaccaagctg
atttttgacgcggaaagcggcaaaatcatcggcggcggtatcgtcggccccaacggcggc
gatatgatcggcgaaatttgcttggcgattgaaatgggttgcgatgcggcggacatcggc
aaaaccatccacccgcacccgacgctgggcgaaagcatcggcatggctgcggaagtggct
ttgggcacatgtaccgacctgcctccgcaacgtaagaagtaa

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