Neisseria zoodegmatis: SAMEA4504057_1259
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Entry
SAMEA4504057_1259 CDS
T06683
Symbol
hfq
Name
(GenBank) regulator
KO
K03666
host factor-I protein
Organism
nzo
Neisseria zoodegmatis
Pathway
nzo02024
Quorum sensing
nzo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4504057_1259 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4504057_1259 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nzo03019
]
SAMEA4504057_1259 (hfq)
03036 Chromosome and associated proteins [BR:
nzo03036
]
SAMEA4504057_1259 (hfq)
Messenger RNA biogenesis [BR:
nzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMEA4504057_1259 (hfq)
Chromosome and associated proteins [BR:
nzo03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SAMEA4504057_1259 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
SNU79753
UniProt:
A0A1X3CQ24
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All DBs
Position
1:1364999..1365280
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AA seq
93 aa
AA seq
DB search
MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKHA
ISTIVPARAVSLQHENKQPAAAPVQVETTQPSA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctaaaggacaaatgttacaagatccttttttgaacgctttgcgtaaagagcat
gtgcctgtttccatctacttggtaaacggcatcaagctgcaggggcaagttgaatcgttt
gaccagtatgttgtattgctgcgtaatacatctgttacgcagatggtttacaaacatgcg
atttccactatcgttccggctcgtgccgtgagcttgcagcatgaaaacaaacagcctgcc
gctgcgccagttcaggttgaaaccacccagccttccgcctaa
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