Neisseria zoodegmatis: SAMEA4504057_1280
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Entry
SAMEA4504057_1280 CDS
T06683
Symbol
hip
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
nzo
Neisseria zoodegmatis
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nzo03032
]
SAMEA4504057_1280 (hip)
03036 Chromosome and associated proteins [BR:
nzo03036
]
SAMEA4504057_1280 (hip)
03400 DNA repair and recombination proteins [BR:
nzo03400
]
SAMEA4504057_1280 (hip)
DNA replication proteins [BR:
nzo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAMEA4504057_1280 (hip)
Chromosome and associated proteins [BR:
nzo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SAMEA4504057_1280 (hip)
DNA repair and recombination proteins [BR:
nzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SAMEA4504057_1280 (hip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
SNU79774
UniProt:
A0A1X3CQG1
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All DBs
Position
1:1385844..1386152
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AA seq
102 aa
AA seq
DB search
MTKSELMVRLAEVFAEKNGTQLVAKDVEYSVKVLVDTMTRSLAKGQRIEIRGFGSFDLNR
RPARIGRNPKTGERVEVPEKFVPHFKPGKELRERVDQAMSDK
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaatggttcgtctggcagaagtattcgctgagaaaaacggtact
caattagtggccaaagatgtagagtacagtgtaaaagttttggtagataccatgactcgt
tcactggctaaaggtcaacgtattgaaatccgaggtttcggcagcttcgatctgaaccgc
cgtccggctcgtattggccgtaaccctaaaaccggtgagcgtgtggaagtgcccgaaaaa
ttcgtgccccacttcaagccgggtaaagagttgcgcgagcgcgtcgaccaagcgatgtca
gacaaataa
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integrated database retrieval system
