Neisseria zoodegmatis: SAMEA4504057_1553
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Entry
SAMEA4504057_1553 CDS
T06683
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nzo
Neisseria zoodegmatis
Pathway
nzo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4504057_1553 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nzo03400
]
SAMEA4504057_1553 (uvrB)
DNA repair and recombination proteins [BR:
nzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4504057_1553 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4504057_1553 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
SNU80042
UniProt:
A0AB38DRT4
LinkDB
All DBs
Position
1:complement(1687680..1689710)
Genome browser
AA seq
676 aa
AA seq
DB search
MKVIQFENSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIA
QSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSA
INEHIEQMRLSATKNLMTRNDVIIVATVSAIYGIGDPTEYQQMVLSVKEGDTIEQRDIIS
TLVSMQYERGEMDFKRGSFRVRGDVIDVYPAESSDNALRISLFDDEIDRLDLFDPLTGGN
IQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRERIDFFTQENRPVETQRIEQRTRFDL
EMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDYLPSNAIMFIDESHVTVTQIGGMYKGD
ASRKQNLVDYGFRLPSARDNRPLKFHEFEKIMPQTIFVSATPAKYEEEHAGQVVEQVVRP
TGLVDPQIEIRPVATQVDDLLSEINDRIAKGERVLVTTLTKRMAEQLTDYYSELGIKVRY
LHSDIDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSL
IQTIGRAARNVNGVAILYADKITDSMKAAIEETERRREKQIKFNEEHGIVPKQITKQVKD
IIDGVYHDDSGSPKGKGRLKTKVKVGEIHTEEDAIKEIAKLERAMQQAARDLQFEEAAVL
RDKIRGIKEGLLFGAE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgattcaattcgaaaattcccccttcaaactccaccagcctttcccgcccgca
ggcgaccagcccaccgccattgccggcctgctcgaagggctttcagacggcctcgcttac
caaaccctgctcggcgtaaccggctcgggcaaaacctataccatggccaacgtgattgcc
caaagcggccgccccgccatcatcatggcgcacaacaaaacgctggcggcgcagctttat
gccgagatgcgcgagttttttcccgaaaacgcagtggaatacttcgtttcctactacgac
tattaccaacccgaagcctatgtgccgtcgcgcgatttatttatcgaaaaagattccgcg
attaacgaacacatcgagcagatgcgcctttccgccaccaaaaacctgatgacgcgcaac
gacgtgattatcgtcgccaccgtgtccgccatctacggtatcggcgaccccaccgagtat
cagcaaatggtgctttccgtaaaagaaggcgacaccatcgagcagcgcgacatcatctcc
accctcgtttccatgcaatacgagcgcggcgaaatggatttcaaacgcggctccttccgc
gtgcgcggcgacgtaatcgacgtatatcccgccgaaagctccgacaacgccttgcgcatc
agcctgtttgacgacgaaatcgaccgcctcgacctattcgacccgcttaccggcggcaac
atccagcgcgtcggccgctacaccgtgtttccctccagccactacgttaccccgcgcgac
accgtgctgcgcgcctgcgaaagcattaaagaagaattgcgcgaacgcattgatttcttt
acccaagaaaaccgccccgtcgaaacccaacgcattgaacagcgcacccgcttcgacctc
gaaatgctctacgaaatgggcttttgcaaaggcatcgaaaactactcgcgccacttttcc
ggcaaaaaagaaggcgaaccgccgcccacgctgatggattatctgccaagcaacgccatc
atgtttatcgacgaaagccacgttaccgtgacccaaatcggcggcatgtacaagggcgac
gccagccgcaaacaaaacctcgtcgactacggcttccgcctgccttccgcccgcgacaac
cgcccgctcaaattccacgaatttgaaaaaatcatgccgcaaaccatcttcgtttccgcc
acccccgccaaatacgaagaagaacacgccggccaagtggtcgagcaagtcgtgcgcccc
accggccttgttgacccgcaaatcgaaatccgccccgtcgccacccaagtggacgactta
ctcagcgaaatcaacgaccgcatcgccaaaggcgagcgcgtactcgtgaccacgctcacc
aaacgcatggccgaacagctcaccgactattacagcgaactcggcatcaaagtgcgctac
ctgcacagcgacatcgataccgtagaacgcgttgaaatcattcgagatttacgcctcggc
ctgtttgacgtgctcgtcggcatcaaccttttgcgcgaaggcttggacatccccgaagtc
tcactcgtcgccatcctcgatgccgataaagaaggcttcctgcgcagccaccgcagcctc
atccaaaccataggacgcgccgcccgcaacgtaaacggcgtagcgattttgtatgccgac
aaaatcaccgattccatgaaagccgccatcgaagaaaccgaacgccgccgcgagaaacag
attaaattcaacgaagaacacggcatcgtgccgaagcagattaccaagcaggtaaaagac
atcatcgacggtgtgtaccacgacgattcaggcagccccaaaggcaaaggccgtctgaaa
accaaagtgaaagtgggcgaaatccacaccgaagaagacgcaattaaagaaatcgccaaa
cttgaaagagccatgcagcaggcagcgagggatttgcagtttgaagaggcagcggtgttg
agggataagatacgggggattaaggaagggttgttgtttggggcggagtga
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integrated database retrieval system
