Neisseria zoodegmatis: SAMEA4504057_2101
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Entry
SAMEA4504057_2101 CDS
T06683
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nzo
Neisseria zoodegmatis
Pathway
nzo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4504057_2101 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzo03021
]
SAMEA4504057_2101 (rho)
03019 Messenger RNA biogenesis [BR:
nzo03019
]
SAMEA4504057_2101 (rho)
Transcription machinery [BR:
nzo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SAMEA4504057_2101 (rho)
Messenger RNA biogenesis [BR:
nzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAMEA4504057_2101 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_22
Mor
Fungal_virus_P2_C
NACHT
Motif
Other DBs
NCBI-ProteinID:
SNU80569
UniProt:
A0AB38DT00
LinkDB
All DBs
Position
1:complement(2272882..2274141)
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AA seq
419 aa
AA seq
DB search
MHVSELQTQHISKLLEMAEQHGIENANRLRKQDLVFAIVRQLMKQGESFTCSGTLEILPD
GFGFLRSADTSYLAGPDDIYVSPSQIRRFNLHTGDTIEGSVRVPKDNERYFALVRLDSIN
GDKPEVCKHKILFENLTPLFPTKQLKLERDIKAEENITSRAIDLVSPIGRGQRALLVAPP
KTGKTVMLQNIAHAITANYPEVELIVLLIDERPEEVTEMSRSVRGEVVSSTFDEPATRHV
QVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNTVVPASGKILTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLDRRMSEKRLFPAINI
NKSGTRREELLVPNDQLQRMWLLRKFLHPMDEIEATEFLVGKLKASKDNNDFFELMRGK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtttctgaactacaaacccagcacatttccaaacttttggaaatggcagaacaa
cacggcattgaaaatgccaaccgcctgcgcaaacaagacctagtattcgccatcgtgcgc
caactgatgaagcagggcgaatccttcacctgctccggcaccttggaaattttgcccgac
ggcttcggcttcttacgcagtgccgacacttcttatctggcaggccccgacgatatttac
gtttcacccagccaaatccgccgctttaacctgcacaccggcgacaccatcgaaggcagc
gtgcgcgtacccaaagacaacgaacgctatttcgctctcgtgcgtttagacagcatcaac
ggcgacaaacccgaagtctgcaaacacaaaatcctctttgaaaacttaaccccgcttttc
cccaccaaacaactcaaactcgagcgcgacatcaaagccgaagaaaacattaccagccgc
gccatcgatctcgtttcccctatcggccgcggtcagcgcgccttgcttgtcgctccgccg
aagaccggtaaaaccgtgatgctgcaaaacatcgcccacgccattaccgccaattatccc
gaagtcgaactgattgttttgctgattgacgaacgtcccgaagaagtaactgaaatgtcg
cgcagcgtgcgcggcgaagtggtgtcgtccacgtttgacgagccggccacccgccacgtt
caagtggctgaaatggtgttggaaaaagccaaacgcatggtcgagcataaaaaagacgtg
gtgattctgctcgattcgatcacccgcttggcgcgcgcctacaataccgtggtgccggct
tcgggcaaaatcctgaccggcggtgtcgatgccaatgcgctgcaccgtccgaaacgcttt
ttcggtgccgcgcgtaatgtggaagagggtggttctttaacgattatcgctactgcgttg
gtggaaaccggcagccgtatggacgatgtgatttacgaagaatttaaaggcaccggcaat
atggaactgcacctcgaccgccgtatgtctgaaaaacgcctgttcccggcgattaatatc
aacaaatccggcacgcgccgcgaagagttgttggtgccgaacgaccagctccaacgcatg
tggctgctgcgcaaattcctgcatccgatggacgagatcgaagccaccgagtttttggtg
ggcaagctcaaagcttccaaagacaacaacgatttctttgagttgatgcgcggtaaatga
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