Neisseria zoodegmatis: SAMEA4504057_2293
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Entry
SAMEA4504057_2293 CDS
T06683
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nzo
Neisseria zoodegmatis
Pathway
nzo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAMEA4504057_2293 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzo03021
]
SAMEA4504057_2293 (rpoA)
03400 DNA repair and recombination proteins [BR:
nzo03400
]
SAMEA4504057_2293 (rpoA)
Enzymes [BR:
nzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAMEA4504057_2293 (rpoA)
Transcription machinery [BR:
nzo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAMEA4504057_2293 (rpoA)
DNA repair and recombination proteins [BR:
nzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAMEA4504057_2293 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
SNU80751
UniProt:
A0AB38DUL3
LinkDB
All DBs
Position
1:complement(2488101..2489087)
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AA seq
328 aa
AA seq
DB search
MQNSTSEFLKPRQIDVDTLSATRAKVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVV
ISGVLHEYSTVDGVQEDVVDILLNLKGVVFKLHGRNSVQLSLKKSGAGVVLANDINLPHD
VEIINPEHVICHLSDNGQIEMEIKVEQGRGYQSVSGRRTVRDESKQIGAIQLDASFSPIS
RVSFEVEPARVEQRTDLDRLVLDIETDGSIDPEEAVRSAARILIDQMSIFADLQGTPVEE
VEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLN
EIKEVLASKGLTLGSKLEAWPPVGLEKP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagcacttccgaatttttgaaacctcgtcaaattgatgttgatactttatct
gcaacccgcgctaaggtatctatgcagccatttgagcgtggtttcggtcacactcttggt
aatgctttgcgtcgtatcttactgtcatccatgaatggttttgcacctactgaagtagtt
atttcgggtgtgttacacgagtactccactgtggacggtgttcaagaggatgttgttgac
atccttttgaacctgaaaggtgtagtattcaaattgcacggaagaaactctgttcagttg
tctctgaaaaagtctggtgctggagtcgtgctggcaaatgatattaacttgcctcatgat
gttgaaatcattaaccctgagcatgtgatttgtcatttgtctgataatggtcagattgaa
atggaaatcaaagttgagcagggacgtggttatcaatctgtttccggtcgtcgtacagta
cgtgatgagagtaagcagattggtgcaattcaattggatgcgagcttttcgcccatcagt
cgtgttagctttgaagttgagcccgcacgcgtagagcagcgtacggatttagatcgtttg
gttttggatattgaaaccgatggttctattgatcccgaagaggctgtacgcagtgcggca
cgtattttaattgatcaaatgtctatttttgcagatttgcaaggaacaccagtcgaagaa
gtagaagaaaaagctcctccgatcgatcctgtattgctgcgcccagtagatgatttggaa
ttaactgtacgctcagctaactgcctgaaagctgaagatatttattatattggtgatttg
attcagcgtactgaaaccgagcttctcaaaacgcctaatttaggtcgtaagtctttaaat
gaaattaaagaagtactagcttccaagggtttaactttgggttctaaattagaagcttgg
ccgccggtgggtttggaaaagccgtaa
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