Strawberry lethal yellows phytoplasma (CPA): SLY_0025
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Entry
SLY_0025 CDS
T02674
Symbol
trmE
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzs03016
]
SLY_0025 (trmE)
Transfer RNA biogenesis [BR:
nzs03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SLY_0025 (trmE)
Prokaryotic type
Methyltransferases
SLY_0025 (trmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Ras
AIG1
Dynamin_N
MMR_HSR1_Xtn
RsgA_GTPase
Roc
AAA_29
GTP_EFTU
MCM
AAA_22
TniB
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGL89951
UniProt:
R4RNF0
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All DBs
Position
complement(24113..25474)
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AA seq
453 aa
AA seq
DB search
MFFDTIAAITTPLGTGGISVIRVSGAQAITEINKIFKGKNLLEALTHTVHHGFILNQDET
ILDEVLVSVFKAPNSFTGENVVEISAHGGILITQMVLERILTLDLRLAYPGEFSQRAYMN
GKIDLVQAEAIMDLIHATNQNAIKIANLGLHKHTSQLVSSLREKILTLIAQIEVNIDYPE
YDDTLLMTQSIIAPQVKSLIEELEAILFHSQKSRYLRDGIKTLIIGRPNVGKSSLLNALL
NEPKAIVSDIAGTTRDFVDASFNCQGITLNLIDTAGIHQTTNPIEKIGISRTKKILSSAE
LILLVLDQSEPLKEDDEKLLELTRLKPRIIIGNKADLSNEKTVTSFPIKNFISISSLKKT
GLDELQKAILQKFQLEQISSKDFNSFSNVRHINQIQIAHQALKDFQTAFMDSMPIDVYSI
DLTKAYQALGKIIGDNQENDLIKELFSKFCLGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgatactattgctgcaatcacaactcccttaggaacaggtgggataagtgtt
attagagttagtggcgctcaagcgattacagaaattaataaaatttttaaaggtaaaaac
ttattagaagctttaacgcataccgtccatcatggttttattttaaaccaagatgaaact
attttagatgaagttttggtctctgtttttaaagctcctaattcttttactggcgaaaat
gttgtagaaattagtgctcatggcggtattttaattactcaaatggtgttagaacgtatt
ttaactttagatcttagattggcttatcctggagaatttagtcaaagagcttatatgaat
ggtaaaattgatttggtgcaggctgaagctatcatggatttgattcatgccactaatcaa
aatgctattaaaattgctaatttagggctccataaacacacttctcaattagttagttct
ttgcgagaaaaaattttgactcttattgctcaaattgaagttaatattgattatcctgaa
tatgatgacactttgttaatgactcaaagcattattgctcctcaagtaaaaagtttaata
gaagaattagaggctattttatttcattctcaaaaaagtcgttatttaagagatggaatt
aaaactttaattattggtcgccctaatgttggtaaatctagcttattaaatgctttatta
aacgaaccaaaagcaattgtttctgacatcgcaggcactacaagagattttgttgatgct
tcttttaattgtcaaggcattacccttaatttaattgatactgcaggaattcatcaaact
acaaacccaattgaaaaaatcggtatttcaaggactaaaaaaattttatcatcagctgaa
cttattttattagttttagatcaaagtgaacctttaaaggaagatgatgaaaaactatta
gaattaacacgtttaaaacctcggattattataggtaacaaagctgatttaagtaatgaa
aaaacagttacttcttttcctatcaaaaattttatttccatttctagtttaaaaaaaaca
ggcttggacgaattacaaaaagctattttacaaaagtttcaattagaacaaatttcatct
aaagattttaattctttttctaacgtgaggcacattaatcaaatacagatagcacatcaa
gccttaaaagattttcaaactgctttcatggattcaatgccaatagatgtttattccatt
gacttaaccaaggcttatcaagctttaggaaaaattattggtgataatcaagaaaatgat
ttaattaaagaattattttctaaattttgtttgggaaaataa
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