Strawberry lethal yellows phytoplasma (CPA): SLY_0055
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Entry
SLY_0055 CDS
T02674
Symbol
dnaC
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLY_0055 (dnaC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nzs03032
]
SLY_0055 (dnaC)
Enzymes [BR:
nzs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SLY_0055 (dnaC)
DNA replication proteins [BR:
nzs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SLY_0055 (dnaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
DEAD
ResIII
DUF87
Motif
Other DBs
NCBI-ProteinID:
AGL89981
UniProt:
R4RXL8
LinkDB
All DBs
Position
53609..54892
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AA seq
427 aa
AA seq
DB search
MIEAERALLGALLLNPEKMDVVINLVNTNNFSNPKHRCIFETMKQLKLQNREIDYVTVGS
VLDNNLYKIGGIDYLIELVETSPASEYLETYIDLIKENSLKKDLLGLIKQLPSELSKTKN
IHNYLQTVKNQVESFMQKTKSPFISTKTLIPYIRQSIVNDDNPNQFVGIKTGFKNLDELI
SGFKPNQLIILGARTGMGKTAFMLNLACNIAKNFTTNPENQKAVIFSLEMAAEELGIRLL
SSASQIPLKQLQQKNLTKNEKLQLLIADDEITQLNILIDDDRNNKIEDIETKCRQMKYTK
GLDIVFIDYLHLLKDPQSFNTYQAISEISRKLKKLASELNIPIVALSQFNRSTYVREVKS
PQLTDLRDAGSIEQDADVVMLLHRESYYQTPDNNPHTNLIIAKNRSGPKGECSFNFYQQI
QRFEAKE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgaacgcgcattattgggagcgctattattaaatccagaaaaaatggat
gttgttataaatttagttaacacaaacaatttttccaaccccaagcatcgttgtatcttt
gagacaatgaagcaattaaaactgcaaaatcgcgaaattgattatgttacggtgggttct
gttttagataacaatttatacaaaataggaggaattgattatttaattgaattagtggag
acgtcccctgcaagtgaatatttagagacatatattgatttaatcaaagaaaattccctt
aaaaaagatttgttaggattaataaaacaattgccttctgaattatcaaaaactaaaaat
attcataattatctgcaaacagtcaaaaaccaagtagaaagttttatgcaaaaaactaaa
tctccttttatttctacaaaaacattaattccttatattcgccaaagtattgttaatgat
gacaaccccaaccaatttgtaggaataaaaacaggctttaaaaatctagatgaattaatt
tctgggtttaaaccaaaccaattaattatcttaggagcaagaactgggatgggaaaaact
gcttttatgttaaatttggcttgtaatattgcaaaaaactttactaccaaccccgaaaac
caaaaagcagttatttttagtttagaaatggcagcggaagaattaggaattaggttactt
tcttctgcttctcaaatccctttaaaacaactccaacagaaaaacttaactaaaaatgaa
aaattacagttacttatcgctgatgacgaaatcacgcaattaaacattttaattgatgat
gatagaaataacaaaattgaagacattgaaaccaaatgccgacaaatgaaatatactaaa
ggacttgatattgtttttattgattacctccatttattaaaagacccccaaagttttaat
acatatcaagcaatatctgagatttcacgcaaattaaaaaaactagcaagtgaacttaat
attccaattgtagctttgagtcaatttaaccgttcaacctatgtaagagaagtcaaaagc
ccacaattaacagatttaagagatgcgggatcaattgaacaagacgctgatgttgtgatg
ttattacaccgcgaaagttattatcaaacacctgataacaacccacatacgaatttaatt
attgccaaaaaccgtagcggtcccaaaggcgaatgtagttttaatttttatcaacaaatc
caaagatttgaagcaaaagaataa
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