Strawberry lethal yellows phytoplasma (CPA): SLY_0330
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Entry
SLY_0330 CDS
T02674
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SLY_0330 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nzs01007
]
SLY_0330 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzs03016
]
SLY_0330 (lysS)
Enzymes [BR:
nzs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SLY_0330 (lysS)
Amino acid related enzymes [BR:
nzs01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SLY_0330 (lysS)
Transfer RNA biogenesis [BR:
nzs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SLY_0330 (lysS)
Prokaryotic type
Other AARSs
SLY_0330 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
STAT_linker
Motif
Other DBs
NCBI-ProteinID:
AGL90250
UniProt:
R4RLN9
LinkDB
All DBs
Position
complement(277688..279181)
Genome browser
AA seq
497 aa
AA seq
DB search
MNKKMTEQEGIRHQKIEELKKLKTEPFGKNFTCSHTIENIILNYQNIDQEWFEENKVNVK
IAGRIILKRGQGKAGFLHLQDFNFKIQVYLRSDLLGDAFLLYQNCDLGDIVGIKGFLFKT
KTKELTIKALDFIHLTKSLKPLPDKFHGLQNREEMRKKRYLDLMVNEKSRQVFLTRSLII
KSIRNFFDNEGFLEVETPILQPSLGGASAKPFITSHNALNSDFYLRIATELPLKKLIVGG
MPKVYEIGRIFRNEGMDATHNPEFSTIEAYQAYSDIQGMMELTQKCLQYICQTVLKSLEI
NYQNKKISFQTFQKISMTDAIKKETGIDFQKKLSQETCLQLAKQHDINVMSHFSQGHIIE
AFFEKYVEHKLIQPTFIYGHPLEISPLAKKNLNDPRFTDRFELFIAGKEFVNAFSELNDP
IEQEKRFLNQLKQKELGDDEACEMDYDFLDALSYGMPPTGGLGMGIDRIVMLLTDTPNIR
DVILFPHFKNKNIIKKK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaatgacagaacaagaaggaattagacaccaaaaaatagaagaattgaaa
aaattaaaaactgaaccttttggtaaaaatttcacttgttcgcacacaattgaaaacatt
attttaaattatcaaaacattgatcaagaatggttcgaagaaaacaaagttaatgtaaaa
attgcaggaagaattattttaaaaagaggacaaggaaaagccggatttttacatctacaa
gattttaattttaaaattcaagtttatcttagatctgatttattaggggatgctttcctt
ctttatcaaaattgtgatttaggtgatatcgtagggattaaaggttttttgtttaaaact
aaaacaaaagagctcacaattaaagctctagattttatccatttaactaaatctttaaaa
ccattaccagataaatttcatggtttgcaaaaccgcgaagagatgagaaaaaaacgttat
ttagatcttatggttaatgaaaaaagtcgacaagtttttttaactcgtagtttaattatc
aaatcaattcgtaatttttttgataatgagggctttttggaggtagaaacccccattttg
caaccttctttgggcggagcttctgccaagccatttattactagccataacgctttaaat
tctgatttttatttaaggatagctaccgaactgcctttaaaaaaattaattgttggtggt
atgccaaaagtttatgaaattggtcgaattttccgtaatgaaggaatggatgcaacccat
aacccggaatttagcactatagaggcttatcaggcttattctgatatacaaggaatgatg
gaattaactcaaaaatgtcttcagtatatttgtcaaactgttttaaaaagtttagaaatc
aattaccaaaataaaaaaattagttttcaaacttttcaaaaaattagcatgacagatgct
atcaaaaaagaaacaggcattgatttccaaaaaaaattatctcaagaaacttgtttacaa
ttagcaaaacaacatgatatcaacgtcatgtctcattttagtcaaggtcatattattgaa
gctttttttgaaaaatacgttgaacataaattaatccagcctacttttatttacggccat
cctttagaaattagtcctttagccaaaaaaaatcttaatgaccctcgttttactgatcgt
tttgaactttttatcgctggaaaagaatttgtgaatgcttttagcgaattaaacgacccc
atcgaacaagaaaaacgttttttaaatcaattaaaacaaaaagaattaggtgacgatgag
gcttgtgaaatggattatgattttttagatgccttaagttacggtatgcctcccactggt
gggctcggaatgggaattgatcgaatagtgatgcttttaaccgatactcccaatatccgt
gatgttattttatttcctcatttcaaaaataaaaacattattaagaaaaaataa
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