Strawberry lethal yellows phytoplasma (CPA): SLY_0416
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Entry
SLY_0416 CDS
T02674
Symbol
pth
Name
(GenBank) Peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nzs03012
]
SLY_0416 (pth)
Enzymes [BR:
nzs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
SLY_0416 (pth)
Translation factors [BR:
nzs03012
]
Eukaryotic type
Release factors
SLY_0416 (pth)
Prokaryotic type
SLY_0416 (pth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
GDE_C
Motif
Other DBs
NCBI-ProteinID:
AGL90336
UniProt:
R4RPC7
LinkDB
All DBs
Position
348121..348693
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AA seq
190 aa
AA seq
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MMKKIIIGLGNPGKEFQNTYHNVGFLALESFLKNNKHQMIPNSYQGHLYQIQLNNCISFL
VKPQMYMNSSGKVVKKILDAYQIKIEDILVILDDIYLPEGKIKLRPQGGHAGHNGLRNII
ECCNTNKFKRLKIGVGYDSNIPLNQYLLTPFNLHQKKQILQNIDKIHEIMSKFIQGISFN
NLMNQYNVIK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaattatcattggtttaggaaatccaggaaaagaatttcaaaatacatat
cataatgtaggttttttagctttagaatcttttttaaaaaataataaacatcaaatgatt
ccgaattcatatcaaggccatctttatcaaattcagttaaataactgtatatctttttta
gttaaaccacaaatgtatatgaattcatctggcaaagtagttaaaaaaattttagatgca
tatcagattaaaatagaagatattttagttattctagatgatatttatttaccagaagga
aaaattaaattaagacctcaaggtggccacgcaggacataatggtttaagaaatattatt
gaatgttgcaatactaataaatttaaaagattaaaaattggggtcggttatgattcaaac
atccctttaaatcaataccttttaaccccttttaatttgcaccaaaaaaagcaaatattg
caaaatattgacaagatacatgaaattatgagcaaatttatccaaggaataagttttaat
aatttgatgaatcaatataacgtaataaaataa
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