Strawberry lethal yellows phytoplasma (CPA): SLY_0433
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Entry
SLY_0433 CDS
T02674
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs03030
DNA replication
nzs03430
Mismatch repair
nzs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLY_0433 (dnaX)
03430 Mismatch repair
SLY_0433 (dnaX)
03440 Homologous recombination
SLY_0433 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nzs03032
]
SLY_0433 (dnaX)
03400 DNA repair and recombination proteins [BR:
nzs03400
]
SLY_0433 (dnaX)
Enzymes [BR:
nzs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLY_0433 (dnaX)
DNA replication proteins [BR:
nzs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLY_0433 (dnaX)
DNA repair and recombination proteins [BR:
nzs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLY_0433 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_5
AAA_30
RCF1-5-like_lid
AAA_assoc_2
AAA_18
PIF1
AAA_14
nSTAND3
AAA_16
Mg_chelatase
AAA_17
AAA_19
UBA_4
TsaE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGL90353
UniProt:
R4S0R4
LinkDB
All DBs
Position
362082..363890
Genome browser
AA seq
602 aa
AA seq
DB search
MVVSYLVLYRKYRPQTFQDVVGQKFIIQTLKNAIRYQKINHCYLFSGNKGTGKTTLAKIF
AKVINCIYPQSGDVCNKCTSCLGSLQTNNDIVELDGASYNGVDEIREIQDKAQYKPHIGK
NKVYIIDEVHVLTPNAFNALLKILEEPPKHVVFILITTQMHKIPETILSRAQSFSFENLS
LENIILQLKKITNLEKIVITDDAIKDIANYSEGSMRNALSLLDQISSYQNNLITSEDIAE
IKGVVSGSFLKNLFCCLIERNYNQALKLLNKAVDSGKNLDLLVANLINSLKNYFLEQLKQ
NEKEQNENLGKKNINNYELELQIDFILQIFLKLQQNLKKSSQKKDLLEIAFIQICYFSPS
HQNLSISETEKILKPNATKIEIEKTKVISEKKPDLNNFSKSIQKKEEALIYPKKEQTITN
NTSTSNFASNSYFKISSLKNLADIALNILSDKNESQRQKIANAWHKLNTNYNFSSKNIAQ
LLYKGSMAALSHKKEMILVYQDEIACKQMLKDVNNKIKNKALKILNNKSCLVKDYICFLE
KDYKDLVTFLQNNSPDLIEHFLENCNWDLDLYKTREKAEELSFIVQFAYDLFGKDKVEVI
NE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
ttggtagtgtcttatcttgttttatatagaaaatatcgacctcaaacttttcaagacgtt
gtcggacaaaaatttattattcaaactttaaaaaatgctattagatatcaaaaaattaac
cactgttatcttttcagcggaaacaaaggaactggaaaaacaactttagccaaaatattt
gctaaagttattaattgcatatatcctcaatcaggagacgtttgcaataaatgcacgtca
tgccttggatctttgcaaacaaacaacgatattgtggaacttgacggagcttcttataat
ggagttgatgaaataagagagatccaagacaaggcccaatataaaccccacattggaaaa
aataaagtctatattatcgatgaagttcatgttttaactcccaatgcttttaacgcttta
ttaaaaattttagaagagccaccaaaacatgttgtctttattttaataaccacacaaatg
cacaaaattcctgaaactattttatcccgtgcgcaaagtttttcttttgaaaatttaagc
cttgaaaatatcattttacaattaaaaaaaattaccaatttagaaaaaattgtaattact
gatgatgctatcaaagatattgctaactattctgaaggaagcatgcgcaatgctttaagt
ttattagatcaaataagttcttatcaaaataatttaattacttctgaagatattgcagaa
atcaaaggagttgtatcaggaagttttttaaaaaatttattttgttgccttatcgaaaga
aactacaatcaagcgttaaaattactaaacaaagcggttgattcagggaaaaaccttgat
ttattagttgccaatttaattaattccttaaaaaattatttcttagaacaattaaaacaa
aatgaaaaagagcaaaatgaaaatttaggcaaaaaaaatataaataattacgagcttgag
ttgcaaattgattttattttgcaaatttttttaaaattacaacaaaatttaaaaaaaagc
agtcaaaaaaaagatttattagaaattgcttttatacaaatatgttatttttctccttct
catcaaaatttatcaatatcagagactgaaaaaatcttaaaaccaaatgcaactaaaatt
gaaattgaaaaaacaaaagtaattagcgaaaaaaaacctgatttaaataatttttccaag
tcaatccaaaaaaaagaagaagcattaatttatccaaaaaaagaacaaacgataacaaat
aatacttctacttctaattttgcttctaattcttattttaaaatttcttctttaaaaaat
ttagcagacattgctttaaatattttatccgataaaaatgaaagccaaagacaaaaaatc
gctaacgcttggcacaagttaaatacaaattataatttttcttctaaaaatatcgctcaa
ctcttatataaaggaagtatggctgctttaagtcacaaaaaagaaatgattttagtttac
caagacgaaatcgcctgtaaacaaatgttaaaagacgttaacaacaagattaaaaataaa
gctttaaaaattttaaataataaaagttgtcttgttaaagattatatttgttttttagaa
aaagattataaagatttagtaacttttttacaaaataattctcctgacttaatcgaacat
tttttggaaaattgcaattgggatctagatttatataaaactagagaaaaggcggaagaa
ctatcttttattgttcaattcgcttatgatttgtttggtaaagataaagtagaagtaata
aatgaatga
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