Strawberry lethal yellows phytoplasma (CPA): SLY_0441
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Entry
SLY_0441 CDS
T02674
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nzs03019
]
SLY_0441 (rnc)
03009 Ribosome biogenesis [BR:
nzs03009
]
SLY_0441 (rnc)
03036 Chromosome and associated proteins [BR:
nzs03036
]
SLY_0441 (rnc)
Enzymes [BR:
nzs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SLY_0441 (rnc)
Messenger RNA biogenesis [BR:
nzs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SLY_0441 (rnc)
Ribosome biogenesis [BR:
nzs03009
]
Eukaryotic type
90S particles
RNase
SLY_0441 (rnc)
Prokaryotic type
rRNA processing factors
SLY_0441 (rnc)
Chromosome and associated proteins [BR:
nzs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SLY_0441 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGL90361
UniProt:
R4RPF3
LinkDB
All DBs
Position
complement(369427..370095)
Genome browser
AA seq
222 aa
AA seq
DB search
MNTEHFLKKLNIVPKNIALYRKALTHSSYSNEKEFLQENNERLEFLGDAIIGLLMADYLY
QKNKENEGVMTKKRAQAVCEKSLTIYAKSINLQNYLFLGKGEKNKDFNTKSIIADAFEAL
FGAIYLDLGYNSAKKVFQRLVIPHLPKAIDIIDFKTQLQEIVQSEKKIIQYKIVSEEGPA
HSKKFIAEVYLDKKILGSGEGTTKKEAEQKAAQEALSKLAKR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgaacattttttaaaaaaactaaatattgttcccaaaaacatcgctttatac
cgcaaagctttaactcacagttcttattccaatgaaaaagaatttttgcaagaaaacaat
gaaagattagagtttttaggcgatgctattattggacttttaatggcagactatttatac
caaaaaaataaggaaaatgaaggcgttatgactaaaaagagagctcaagctgtttgtgaa
aagtctttaaccatttatgccaaaagtattaatttacaaaattatctttttttaggaaaa
ggagaaaaaaacaaagattttaataccaaaagcattattgctgatgcttttgaagctttg
tttggtgctatttatctagatttgggttataattccgctaaaaaagtttttcaaagattg
gtcattcctcatttgccaaaagcaattgacattattgattttaaaacacaattgcaagaa
atagtacaatccgaaaaaaagattattcaatacaaaatagtttcagaagagggacctgca
cattccaaaaaatttatcgccgaagtttatttagacaaaaaaatattagggagcggtgaa
gggacaaccaaaaaagaagcagaacaaaaagccgctcaagaagcgttatcaaaattagca
aaaagataa
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