Strawberry lethal yellows phytoplasma (CPA): SLY_0512
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Entry
SLY_0512 CDS
T02674
Symbol
pdhD
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs00010
Glycolysis / Gluconeogenesis
nzs00020
Citrate cycle (TCA cycle)
nzs00260
Glycine, serine and threonine metabolism
nzs00280
Valine, leucine and isoleucine degradation
nzs00620
Pyruvate metabolism
nzs00630
Glyoxylate and dicarboxylate metabolism
nzs00640
Propanoate metabolism
nzs00670
One carbon pool by folate
nzs00785
Lipoic acid metabolism
nzs01100
Metabolic pathways
nzs01110
Biosynthesis of secondary metabolites
nzs01120
Microbial metabolism in diverse environments
nzs01200
Carbon metabolism
nzs01210
2-Oxocarboxylic acid metabolism
nzs01240
Biosynthesis of cofactors
Module
nzs_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SLY_0512 (pdhD)
00020 Citrate cycle (TCA cycle)
SLY_0512 (pdhD)
00620 Pyruvate metabolism
SLY_0512 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SLY_0512 (pdhD)
00640 Propanoate metabolism
SLY_0512 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SLY_0512 (pdhD)
00280 Valine, leucine and isoleucine degradation
SLY_0512 (pdhD)
00310 Lysine degradation
SLY_0512 (pdhD)
00380 Tryptophan metabolism
SLY_0512 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SLY_0512 (pdhD)
00670 One carbon pool by folate
SLY_0512 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nzs04147
]
SLY_0512 (pdhD)
Enzymes [BR:
nzs01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SLY_0512 (pdhD)
Exosome [BR:
nzs04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SLY_0512 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
AlaDh_PNT_C
DAO
GIDA
NAD_binding_8
FAD_binding_2
FAD_binding_3
Lys_Orn_oxgnase
2-Hacid_dh_C
Thi4
3HCDH_N
Trp_halogenase
TIM-barrel_EndoS
Motif
Other DBs
NCBI-ProteinID:
AGL90431
UniProt:
R4RPP8
LinkDB
All DBs
Position
443287..444660
Genome browser
AA seq
457 aa
AA seq
DB search
MKNYDILIIGGGPGGYVAAIKAAQLGAKVALVEDHKLGGICLNYGCIPTKTYLKSAKVYQ
TIQHAQDFGITLNQPPTFNWLAIFNRKNKIVNQLTSGIAFLLKKNKVDVYNGFAVPLSPQ
KIQVNKEILETEKLIIATGATAFIPPIPGALEAYQKNILKTSKELLQLDKHPKNIIIIGG
GVIGVEFATIHKSFGAEVTILERQSNILNGSDHDIVNAYTKRLKSDGINVLTEVQINSIQ
GHKVTYTHQNIQTTQEAEVILMAAGTKPNLAGLEKLDLEKNNNSIVTDEFLQTSIPGVYA
IGDVNGKYMLAHVASHEGIIAVMHALGKGEHGINYNRIPSCIYGFPEIASIGMTEQDAQM
KKIDYKVSKVPLSAIGKALADGEKEGFAKIIVDKKHLEIIGMHIYAYNATELISEIAVGM
ELEGTAYELAQAIHPHPTLSELTFEALLGAIDKPIHV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattatgatattttaataatcggtggaggaccgggaggatatgtggccgcaatc
aaggcggcccaattaggggctaaagttgctttagttgaagatcataaattaggcggcatt
tgtcttaattatggatgcattcctaccaaaacttatttaaaaagtgccaaagtttatcaa
actatccaacatgctcaagattttggcattacacttaatcaaccgcccacttttaattgg
cttgctatttttaatcgtaaaaataaaattgtcaatcaattaactagtggcatcgctttt
ttacttaaaaaaaataaagttgatgtttataatgggtttgcagttcctctttctcctcaa
aaaatccaagttaataaagaaatattagaaactgaaaaacttattattgcaacaggcgct
accgcctttattcctccaattccaggagctttagaagcttatcaaaaaaatattttaaaa
actagcaaagaattattgcaattagacaaacatcccaaaaatattattattatcggcggc
ggagtaattggggttgaatttgctaccattcataaatcttttggtgctgaagttactatt
ttagaaagacaaagcaatattttaaatggttcagatcatgatattgttaacgcttacact
aaaaggttaaaaagtgatggaattaatgttttaacagaagttcaaatcaattcaattcaa
ggtcataaagttacctatactcaccaaaatattcaaaccactcaagaagcagaagttatt
ttaatggctgcaggaacaaaacctaatttggctggtttagaaaaacttgatttagaaaaa
aataacaatagtattgttactgatgaatttttacaaacttctattcctggagtttatgca
atcggtgatgttaacggtaagtatatgttggctcacgtagctagtcatgaaggaattatt
gccgtaatgcatgctttaggcaaaggagaacatggtataaattataatcgtattccttct
tgtatttatggctttcctgaaattgcttctatcggaatgaccgaacaagatgcccaaatg
aaaaaaatagattataaagtttctaaagttccactttctgccatcggaaaagctttagct
gatggtgaaaaagaaggatttgctaaaattattgttgataaaaaacatttagagattatt
ggtatgcatatttatgcttataatgcaactgaattaattagcgaaattgctgttggaatg
gaattagaaggaacagcatatgaattggcccaagcaattcatcctcatccaacattatca
gaattaacttttgaagctcttttaggtgctatcgacaaacctattcacgtttaa
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