Strawberry lethal yellows phytoplasma (CPA): SLY_0578
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Entry
SLY_0578 CDS
T02674
Symbol
dnaC
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLY_0578 (dnaC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nzs03032
]
SLY_0578 (dnaC)
Enzymes [BR:
nzs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SLY_0578 (dnaC)
DNA replication proteins [BR:
nzs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SLY_0578 (dnaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
DEAD
DNA_pol3_delta
Peptidase_S76
Motif
Other DBs
NCBI-ProteinID:
AGL90495
UniProt:
R4RMG5
LinkDB
All DBs
Position
501936..503225
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AA seq
429 aa
AA seq
DB search
MIEAERALLGALLLNPEKMDVVINLVNTNDFSNPKHRYIFETMKQLKMQNREIDYVTVSS
VLDNNLYKIGGTDYLIELGGVEASPAIEYLETYIDLIKENSLKRDFLGFIKQQQTALSKS
KNIHNFFQAVKDQVESFMQKTKSPFISTKTLIPDIRQSILNDDNPNQFIGIKTGFKNLDE
LISGFKPNQLIILGARTAMGKTAFMLNLACNIAKNFTSNNKNQKAVIFSLEMAAEELGIR
LLSSASQIPLKQLQHKNLTKNEKLQLFIADDKITQLNILIDDDRNNKMKDIETKCRQMKY
AKGLDIVFIDYLHLLRKEQNVNIYQEISEISRKLKNLASELNIPIVALSQLSRDLEKRVD
KRPVLSDLSNSGSIEQDADVVMLLHRESYYQKDDNNPHTNLIIAKNRSGQLGECSFNFYK
QIQRFEQKE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgaacgcgcattattaggagcactattattaaatccagaaaaaatggat
gttgttataaatttagttaacacaaatgatttttccaaccccaagcatcgttatatcttt
gagacaatgaagcaattaaaaatgcaaaatcgcgaaattgattatgttacggttagttcc
gttttagataacaatttatacaaaataggaggaactgattatttaattgaattaggagga
gtggaggcgtcccctgcaattgaatatttagaaacttacattgatttaatcaaagaaaat
tcccttaaaagagattttttaggattcatcaaacaacaacaaaccgcattatcaaaaagt
aaaaatattcacaatttttttcaagcagtcaaagaccaagtagaaagttttatgcaaaaa
accaaatctccttttatttctacaaaaacattaattcctgatattcgccaaagtattctc
aatgatgacaaccccaaccaatttataggaataaaaacaggctttaaaaatctagatgaa
ttaatttctggtttcaagccaaaccaattaattatcttaggagcaagaactgcgatggga
aaaactgcttttatgcttaatttggcttgtaatattgcaaaaaactttactagcaacaac
aaaaaccaaaaagcagttatttttagtttagaaatggcagcggaagaattaggaattagg
ctactttcttctgcttctcaaatccctttaaaacaactccaacacaaaaacttaactaaa
aatgaaaaattacagttatttatcgctgatgacaaaattacacaattaaacattttaatt
gatgatgatagaaataacaaaatgaaagacattgaaaccaaatgccgtcaaatgaaatat
gctaaaggacttgatattgtttttattgattacctccatttattaagaaaagaacaaaat
gttaatatatatcaagaaatatctgaaatttcacgcaaattaaaaaacctagcaagtgaa
cttaatattccaattgtagctttatctcaattatcaagggatcttgaaaaaagagtagac
aaaaggcctgttttatccgatttaagtaactcaggatcgatagaacaagacgctgatgtt
gtgatgttattgcaccgcgaaagttattaccaaaaagatgataacaacccacatacaaat
ttaattattgccaaaaaccgtagcggtcaattaggtgaatgtagttttaatttttataaa
caaatccaaagatttgaacaaaaagaataa
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