Strawberry lethal yellows phytoplasma (CPA): SLY_0663
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Entry
SLY_0663 CDS
T02674
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLY_0663 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nzs03019
]
SLY_0663 (groL)
03110 Chaperones and folding catalysts [BR:
nzs03110
]
SLY_0663 (groL)
03029 Mitochondrial biogenesis [BR:
nzs03029
]
SLY_0663 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nzs04147
]
SLY_0663 (groL)
Enzymes [BR:
nzs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SLY_0663 (groL)
Messenger RNA biogenesis [BR:
nzs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SLY_0663 (groL)
Chaperones and folding catalysts [BR:
nzs03110
]
Heat shock proteins
HSP60 / Chaperonin
SLY_0663 (groL)
Mitochondrial biogenesis [BR:
nzs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SLY_0663 (groL)
Exosome [BR:
nzs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SLY_0663 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SLY_0663 (groL)
Exosomal proteins of breast cancer cells
SLY_0663 (groL)
Exosomal proteins of colorectal cancer cells
SLY_0663 (groL)
Exosomal proteins of bladder cancer cells
SLY_0663 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Fam20C
Motif
Other DBs
NCBI-ProteinID:
AGL90578
UniProt:
R4S1D7
LinkDB
All DBs
Position
569276..570886
Genome browser
AA seq
536 aa
AA seq
DB search
MSKKILYGKDARKALLQGVDAIANTVKVTLGPKGRNVVLEKSYESPVIVNDGVSIAKEIE
LKNPYQNMGAKLVYEVAAKTNDLAGDGTTTATVLAQSMIHRGFKAIDSGANPMLVKEGIQ
KAAQVVSEKLLEKSKKVALQTDIQNIASISSGSQEIGKIIAQAMEKVGKNGVINVDESKG
FETNLEVVQGLQYDKGYASPYFASDRESMAVELSQPLVLVTDHKISTIQEILAILENVVK
ESKALLIIAESVETEVLGVLVANKLRGTFNVVVTNAPGFGDNQKETLQDIAALTKATFVS
KDLNMKLADVKTADLGTINKVIIKKDNTTLVGATPNKALEQRIQLLETQIKNSTVDYETK
SLQERLAKLTGGIALIKVGATTDTELKDKKLRLEDALNATKAAVTEGTVVGGGKALVEVY
QELKDTLFDENKEIQKGINVVIESLLTPTYQIAENAGFDGDHIVRQQLNQKTNFGFDAKN
GKYVDLLDAGIIDPTKVNRQAVINSASISSLMITTQAAVVTIKDDAANQLGKELQE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaatcctttatggcaaagacgcaagaaaagcattattacaaggtgtagat
gcaattgcaaacactgtcaaagttactttaggaccaaaagggcgtaatgttgttttagaa
aaatcttacgaatctcctgttattgtcaatgatggtgtttcgattgctaaagaaattgaa
ttaaaaaacccttatcaaaatatgggcgctaaattagtttatgaagttgccgcaaaaact
aatgatttagcaggtgatggaacaactactgccactgttttggctcaaagcatgattcat
cgtggttttaaagcgattgattcaggagcaaatccgatgttagtgaaagaaggaattcaa
aaagcagctcaagtggtttctgaaaaacttttagaaaaatccaaaaaagtagcgcttcaa
accgatatccaaaacatcgcatcaatttcttctggtagtcaagaaattggaaaaataatc
gctcaagcaatggaaaaagtaggcaaaaacggcgttattaacgttgatgaatctaaagga
tttgaaacaaatttagaagttgttcaaggtttgcaatatgataaaggttatgcctctcct
tattttgcttctgacagagaaagcatggcagtagaattaagtcaacctttagttttagtt
actgatcacaaaattagtacaattcaagaaattttggctattttagaaaacgtagttaaa
gaatccaaagctttattaattattgcagaatcagtagaaactgaagttttaggggttttg
gtagctaataaattaagagggacttttaatgtagttgttactaatgctcctggttttggc
gacaaccaaaaagaaaccttacaagatattgctgctttaactaaagcaacttttgtttct
aaagatctcaacatgaaactagcagatgtaaaaactgctgacctaggaaccattaataaa
gtcattattaaaaaagataatactactttagtgggtgcaactccaaataaagctttagag
caacgaattcaattattagaaactcaaattaaaaattcaacagttgattatgaaactaaa
tctttacaagaaagattggcgaaattaactggtgggattgctttaattaaagtaggagca
actaccgataccgaattgaaagataaaaaattacgtttagaagacgctcttaacgcaacc
aaagcggctgtgaccgaaggaactgtagtcggaggcggtaaagcattagttgaagtttat
caagaattaaaagacactttatttgatgaaaataaagaaattcaaaaagggattaacgta
gttattgaaagtcttttaactcctacttaccaaattgctgaaaatgctgggtttgatggt
gaccacattgtaagacaacaattaaaccaaaaaactaattttggatttgatgccaaaaac
ggtaaatacgttgacttgttggatgcagggatcattgaccctactaaagtgaatcgccaa
gcagttattaattcagcctcaatttcttctttaatgattacaactcaagcagctgttgtg
acaattaaagacgatgcagctaatcaattaggaaaagaattgcaagaataa
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