Strawberry lethal yellows phytoplasma (CPA): SLY_0735
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Entry
SLY_0735 CDS
T02674
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs00260
Glycine, serine and threonine metabolism
nzs00630
Glyoxylate and dicarboxylate metabolism
nzs00670
One carbon pool by folate
nzs00680
Methane metabolism
nzs01100
Metabolic pathways
nzs01110
Biosynthesis of secondary metabolites
nzs01120
Microbial metabolism in diverse environments
nzs01200
Carbon metabolism
nzs01230
Biosynthesis of amino acids
nzs01240
Biosynthesis of cofactors
nzs04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SLY_0735 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SLY_0735 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SLY_0735 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SLY_0735 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SLY_0735 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SLY_0735 (glyA)
Enzymes [BR:
nzs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SLY_0735 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
OKR_DC_1
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGL90650
UniProt:
R4RMT5
LinkDB
All DBs
Position
complement(624885..626141)
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AA seq
418 aa
AA seq
DB search
MLDNFMKSQLSLKDPKIFELIEQEKKRQKENIILIASENFVSKEVLETQGSILTNKYAEG
YPGKRYYHGCGNVDDIEQIAIERAKKLFNARYANVQPHSGSQANMAVLQALLQPNDKILS
LSLNDGGHLTHGHKLSFSGKYYQSYSYNVDPTTEMLDYESIRKLALEIKPKLIIAGYSAY
SRKINFQKFREIANEVNAYLMADIAHIAGFVACKLHPCPLEAQADIVTSTTHKTLRGPRG
GLILTNKEKIMQQINRSVFPGIQGGPLMHVIAAKAVSFKEAQSLEFKNYQQQVIKNAQAF
AQTFQKKGYHVVSQGTDNHLFLINLKKTNPLFTGEKIANILEKVNIIVNKNTIPFDQEKP
MFTSGIRLGTPAMTTKGFQEADFIKLADLIDQAIKNRDDNVYLQKIKKEVLDWTNDFK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgttagataattttatgaaatcacaattaagtttaaaagatccaaaaatatttgaacta
atcgaacaagaaaaaaaaagacaaaaagaaaatatcatattaattgcttccgaaaacttc
gtttccaaagaagttttagaaactcaaggtagtattttaactaataaatacgccgaagga
tatcctggaaaaagatattatcatggttgtggtaatgtagatgatattgaacaaatagcc
atcgaaagggcgaaaaaactctttaatgctcgttatgccaacgttcaaccgcattcaggt
tctcaagctaatatggcagttttacaagctttattgcaacctaacgataaaattttaagt
ttgtctttaaacgatggtgggcatttaactcacggacataaattaagtttttcaggtaaa
tattatcaatcttattcttataatgtcgatccaacaacagaaatgcttgattatgaatca
attagaaaactggctttggaaatcaaaccaaaattaattatcgcaggatattctgcttat
tccagaaaaattaattttcaaaaattccgtgagattgctaatgaagtcaatgcttattta
atggctgatattgctcatattgcaggctttgttgcatgcaaattacacccttgtccttta
gaagctcaagcagatatagttacttcaacgactcacaaaactttaagaggacctcggggg
ggattgattttaaccaacaaagaaaaaataatgcaacaaattaatagatctgtttttccg
ggaattcaaggagggcctttgatgcatgttattgctgctaaagctgtttccttcaaagaa
gctcaaagtttagaatttaaaaattatcaacaacaagtaattaaaaacgctcaagcattt
gctcaaacttttcaaaaaaaaggttatcacgttgtaagtcaaggaactgataatcattta
tttttaattaatttaaaaaaaacaaaccctctttttaccggagaaaaaattgcaaacatt
ttagaaaaagttaacattatagtcaacaaaaacactattccttttgatcaagaaaaacca
atgtttactagtggtattaggttgggaacgcctgccatgacaacaaaaggatttcaagaa
gcagatttcattaagttggcagatttgattgatcaggccatcaaaaatagggacgacaac
gtgtatctgcaaaaaataaaaaaagaagttctagattggacaaatgattttaaataa
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