Strawberry lethal yellows phytoplasma (CPA): SLY_0854
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Entry
SLY_0854 CDS
T02674
Symbol
dnaC
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLY_0854 (dnaC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nzs03032
]
SLY_0854 (dnaC)
Enzymes [BR:
nzs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SLY_0854 (dnaC)
DNA replication proteins [BR:
nzs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SLY_0854 (dnaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
DEAD
ThiJ_like
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGL90769
UniProt:
R4S1S3
LinkDB
All DBs
Position
complement(732918..734201)
Genome browser
AA seq
427 aa
AA seq
DB search
MIEAERALLGALLLNQEKMDAVINLVNTNNFSNPKHRCIFETMKQLKLQNREIDYVTVGS
VLDNNLYKIGGIDYLIELVEAAPASEYLETYIDLIKENSLKRDLLGLIKQLPTALSKSKN
IHNYLQTVKNQVESFMQKTKSPFISTKTLIPYIRQSIVNDDKDNQLVGIKTGFKNLDELI
SGFKPNQLIILGARTGMGKTAFMLNLACNIAKNFTTNPETQKAVIFSLEMAAEELGIRLL
FSASQIPLKQLQHKNLTKNDKLQLLIADDKITQLNILIDDDRNNKIEDIKTKCRQMKYTK
GLDIVFIDYLHLLKDDQSFNTYQAISVISRELKKLASELNIPIVALSQMNRATYVREVKS
PQLTDLRDSGTIEQDADVVMLLHRESYYQKPDIDPHTNLIIAKNRSGQLGECSFNFYKKI
QRFEAKE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgaacgtgcattattgggagcactattgttaaatcaagaaaaaatggat
gctgttataaatttagtcaacacaaacaatttttccaaccccaagcatcgttgtatcttt
gagacaatgaagcaattaaaactgcaaaatcgcgaaattgattatgttacggtgggttct
gttttagataacaatttatacaaaataggaggaattgattatttaattgaattagtggag
gcggcccctgcaagtgaatatttagagacatatattgatttaattaaagaaaattccctt
aaaagagatttgttaggattaatcaaacaattaccaaccgcattatcaaaaagtaaaaat
attcacaattatctgcaaacagtcaaaaaccaagtagaaagttttatgcaaaaaaccaaa
tctccttttatttctacaaaaacattaattccttatattcgccaaagtattgttaatgat
gacaaagacaaccaacttgtaggaataaaaacaggctttaaaaatctagatgaattaatt
tctggtttcaaacctaaccaattaattatcttaggtgcaagaactggaatggggaaaact
gcttttatgttaaatttggcttgtaatattgcaaaaaactttactaccaaccccgaaacc
caaaaagcagttatttttagtttagaaatggcagcggaagaattaggaattaggttactt
ttttctgcttctcaaatccctttaaaacaactccaacacaaaaatttaactaaaaatgac
aaattacaattacttatcgctgatgacaaaattacgcaattaaacattttaattgatgat
gatagaaataacaaaattgaagatattaaaaccaaatgccgtcaaatgaaatatactaag
ggacttgatattgtctttattgattacctccatttattaaaagacgaccaaagttttaat
acataccaagcaatatctgtgatttcgcgcgaattaaaaaaactagcaagtgaacttaat
attccaattgtggctttgagtcaaatgaaccgtgcaacttatgtaagagaagttaaaagc
ccacaattaacagatttaagagattcaggaacaatcgaacaagacgctgatgttgtgatg
ttattacaccgcgaaagttattatcaaaaacctgatattgacccacatacgaatttaatt
attgccaaaaaccgtagcggtcaattaggtgaatgtagttttaatttttataaaaaaatc
caaagatttgaagcaaaagaataa
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