Strawberry lethal yellows phytoplasma (CPA): SLY_0919
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Entry
SLY_0919 CDS
T02674
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzs03016
]
SLY_0919 (truA)
Enzymes [BR:
nzs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SLY_0919 (truA)
Transfer RNA biogenesis [BR:
nzs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SLY_0919 (truA)
Prokaryotic type
SLY_0919 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AGL90834
UniProt:
R4S1Y7
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All DBs
Position
complement(793774..794511)
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AA seq
245 aa
AA seq
DB search
MFLEKYFYKLILSYDGTCYCGYQKQPQTKTIQQTLENALKSMTKRQINTFAASRTDKGVH
AQEQTIHFQTAFAIELKRFKNTLNRILPPDIRIKKIEKATADFHARYWAKSKIYHYIFAK
KPLNAFNYRFQVFVANLDFAKIKSAMNLIIGKYNFASFTNDKKEKNFNKTVLNAFVKETS
QNYILIFHADGFLKYMVRFLVGGLIEIGKNKMSLELFKAMLTNTTNQKVSLLAPAKGLFL
KKIFY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtttttggaaaagtatttttataaattaattttaagttatgatggcacttgttattgc
ggataccaaaaacaaccccaaacaaaaacgattcaacaaacattagaaaatgctttaaaa
tcgatgactaaacgtcaaattaatacttttgcagctagcagaactgataaaggtgtacat
gctcaagaacaaacaattcattttcaaactgcttttgcgattgaactaaaacgttttaaa
aacactcttaatcgtattttaccgcctgatattagaattaaaaaaatagaaaaagcaaca
gctgattttcatgctcgttattgggcaaaatccaaaatttaccattatatttttgccaaa
aaacctttaaatgcttttaattatcgttttcaagtttttgttgctaaccttgattttgca
aaaataaaatccgctatgaatttgattattggaaaatataattttgcctctttcactaac
gacaaaaaagaaaaaaattttaataaaactgttttaaatgcttttgtgaaagaaacttcc
caaaattatattttaatttttcatgcagatggttttcttaagtatatggttcgatttttg
gtgggggggttgattgaaatcgggaaaaataaaatgtctttagaactttttaaagctatg
ttaaccaacacaactaatcaaaaagtatcccttttagctccagcgaaaggtttattttta
aaaaaaattttttattaa
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