Strawberry lethal yellows phytoplasma (CPA): SLY_1017
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Entry
SLY_1017 CDS
T02674
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzs03016
]
SLY_1017 (truB)
Enzymes [BR:
nzs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SLY_1017 (truB)
Transfer RNA biogenesis [BR:
nzs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SLY_1017 (truB)
Prokaryotic type
SLY_1017 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGL90931
UniProt:
R4RR21
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All DBs
Position
complement(875873..876754)
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AA seq
293 aa
AA seq
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MLSCSNKNKMNGFFLVHKPSQLTSHDVVYQIKKKFHLDKVGHTGTLDPLASGLLIVCVGK
ATKLSFLFDGLDKTYQGTFIFNRKYDTLDVTGKLLDTKVNILNQQLIQKTFASFHQKSYF
QTPPMFSAIKVNGQKMYHLARKNKIIDLPPKKVMIHHLETQSLLKNDQIDFLTTVSKGTY
IRSLAQDIASKMNTYGALLSLKRVAIGPYLLQNAKTVDDLTRDDFILDSSLFESCDKIIL
NDYLIKLVQNGVYLDQRQTTTEKPFIVQDSNHNLIAYYDVLEKNKYYPRYFFK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgttatcatgttccaataaaaataaaatgaatggtttctttttagttcacaaaccttcc
caactcacttctcatgatgtagtttatcaaattaaaaaaaaatttcaccttgataaggtg
ggtcacacaggaacactagatcctttagcgtcaggacttttaattgtttgtgttggtaag
gccacaaagttatcttttttgtttgatggccttgacaaaacttatcaaggaacttttatt
tttaatcgcaaatatgatactttagatgtgacaggtaagttattggatactaaagtaaat
attttaaaccaacaattaatccaaaaaacttttgcctcttttcatcaaaaaagttatttc
caaacacctcctatgttttcagcgatcaaagtcaatggccaaaaaatgtatcatttagct
cgcaaaaataaaatcattgaccttccacctaaaaaagttatgattcatcatttagaaacc
caatctttattaaaaaatgatcaaattgattttttaacaacagtttctaaaggaacttat
attcgcagtttggcgcaagatatagcttcaaaaatgaatacttatggtgcactactttct
ttgaaacgtgtggctattggaccttatttattgcaaaatgccaaaacagtggatgattta
actagggatgattttattttggattcttctttatttgaatcttgcgataaaattatttta
aatgactatttaattaaattagttcaaaatggtgtttatttagatcaaaggcaaacaaca
actgaaaaaccttttattgtgcaagatagtaaccataatttgattgcttattatgatgtt
ttggaaaaaaataaatattatccgcggtatttttttaaataa
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