Strawberry lethal yellows phytoplasma (CPA): SLY_1031
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Entry
SLY_1031 CDS
T02674
Symbol
ssb
Name
(GenBank) Single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs03030
DNA replication
nzs03430
Mismatch repair
nzs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLY_1031 (ssb)
03430 Mismatch repair
SLY_1031 (ssb)
03440 Homologous recombination
SLY_1031 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nzs03032
]
SLY_1031 (ssb)
03400 DNA repair and recombination proteins [BR:
nzs03400
]
SLY_1031 (ssb)
03029 Mitochondrial biogenesis [BR:
nzs03029
]
SLY_1031 (ssb)
DNA replication proteins [BR:
nzs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SLY_1031 (ssb)
DNA repair and recombination proteins [BR:
nzs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SLY_1031 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
SLY_1031 (ssb)
Mitochondrial biogenesis [BR:
nzs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
SLY_1031 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
AGL90945
UniProt:
R4RNL3
LinkDB
All DBs
Position
884659..884970
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AA seq
103 aa
AA seq
DB search
MLNRTQLIGRLTSDPKKEFLNSKGERIAKVDFDLVVNIKDKVQYVPCVAFRTQADNLAQY
TRKGSRIYSEGPIDVQKYTNNNKETKTYIRVVVKHIIFLDPKN
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatagaacccaattaatcggccgtctaacaagcgacccaaaaaaagaattttta
aacagcaaaggagaacgaattgctaaagttgatttcgacttagttgtaaatataaaagac
aaagtgcaatacgtaccctgcgtcgctttccgaacacaagccgacaacctagcccaatac
acacgcaaaggttctaggatatactccgaagggccaatcgacgttcaaaagtacaccaac
aataacaaagagaccaaaacatacataagagttgttgttaaacacatcattttcttagac
cctaaaaactaa
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