Nitrosopumilus zosterae: NZOSNM25_000023
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Entry
NZOSNM25_000023 CDS
T08647
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nzt
Nitrosopumilus zosterae
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzt03016
]
NZOSNM25_000023
Enzymes [BR:
nzt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NZOSNM25_000023
Transfer RNA biogenesis [BR:
nzt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NZOSNM25_000023
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Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
BDQ29934
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All DBs
Position
complement(21930..22472)
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AA seq
180 aa
AA seq
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MRTFVAIEISNNKVIDSIKNIQNKIKIDAKPIDVKNLHFTLQFLGEISDETSKKIIHALN
TIEFSNFNINLIGIGAFPKPKFPRVVWIGTDENGGNMLTQLAKKVEKVLEPLGFSPDKPF
KPHITVFRIKKKIGDITKELDSQKMIDFGIQEITSFKLKKSELTFSGPIYSDLEEIKAKK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttttgtagcaatagaaatttcaaataataaagtaattgattctataaaaaat
attcaaaataaaatcaagatcgatgcaaaacctattgatgtgaaaaatttgcattttaca
ttacaatttttaggtgaaatttcagacgaaacatctaagaaaattattcatgctcttaat
acaatagagttttcaaattttaatattaatttgataggaattggtgcattcccgaaacct
aaatttccaagagtggtttggataggtacggatgaaaatggaggcaatatgttaactcag
ttagcaaaaaaagtagagaaagtcttagaaccattaggattttctcctgacaaaccattc
aaaccacacattacagtatttaggattaaaaagaagataggagatataacaaaagaattg
gatagtcaaaaaatgatagactttggcattcaagaaataactagtttcaaattgaaaaaa
agtgaacttacatttagtggaccaatttattcggatttggaggagattaaagctaaaaaa
tga
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