KEGG   Nitrosopumilus zosterae: NZOSNM25_000177
Entry
NZOSNM25_000177   CDS       T08647                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
nzt  Nitrosopumilus zosterae
Pathway
nzt03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nzt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NZOSNM25_000177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nzt03021]
    NZOSNM25_000177
Transcription machinery [BR:nzt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     NZOSNM25_000177
 Prokaryotic type
  Archaeal type
    TFE
     NZOSNM25_000177
SSDB
Motif
Pfam: TFIIE_alpha DUF8617 D5_N Zn_ribbon_RRN7 DUF8512 Zn_Ribbon_TF Sushi_2 TrmB Sigma70_r3 DUF7086 IBR DNA_ligase_ZBD zf-C3HC Zn_ribbon_Com Zn_ribbon_recom Zn_ribbon_3 zf_CopZ
Other DBs
NCBI-ProteinID: BDQ30085
LinkDB
Position
complement(150225..150740)
AA seq 171 aa
MVDKYEDPFVRIASMIGGDEYLKVARSLLKAEDATDEEIASSTGLRINMVRKVLYDLFGK
SLITGIRVKDERKGWFVYRWRTRREEVEHFIESQKKKIEERLQQRLDYENASDFYHCGNE
DCPRVTFESALDGMFKCPSCGSVLNLKKNDKSKKAYSKKIDEIKKDMQQTF
NT seq 516 nt   +upstreamnt  +downstreamnt
ttggtagacaaatacgaagatccttttgttagaatagcctccatgataggaggggatgaa
tacctcaaagtagcaagatcattactcaaagcagaagatgcaactgatgaagaaattgca
agctctactggtcttaggatcaacatggtaagaaaagtattgtatgatttgtttggaaaa
tccttaatcactggaatcagagtaaaagatgaaagaaaggggtggtttgtctacagatgg
agaaccagaagagaagaagtagagcattttattgaaagccagaaaaagaaaattgaagag
agattacaacaacgattagattatgaaaatgcttcagacttttatcattgtggtaatgaa
gactgccccagagttacatttgagagtgcacttgatggaatgttcaaatgcccatcatgt
ggaagtgttctaaacctaaaaaagaatgataaatctaaaaaagcatattcaaagaaaatt
gatgaaatcaagaaagatatgcagcaaacattctga

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