Nitrosopumilus zosterae: NZOSNM25_000177
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Entry
NZOSNM25_000177 CDS
T08647
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_000177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_000177
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
NZOSNM25_000177
Prokaryotic type
Archaeal type
TFE
NZOSNM25_000177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
DUF8617
D5_N
Zn_ribbon_RRN7
DUF8512
Zn_Ribbon_TF
Sushi_2
TrmB
Sigma70_r3
DUF7086
IBR
DNA_ligase_ZBD
zf-C3HC
Zn_ribbon_Com
Zn_ribbon_recom
Zn_ribbon_3
zf_CopZ
Motif
Other DBs
NCBI-ProteinID:
BDQ30085
LinkDB
All DBs
Position
complement(150225..150740)
Genome browser
AA seq
171 aa
AA seq
DB search
MVDKYEDPFVRIASMIGGDEYLKVARSLLKAEDATDEEIASSTGLRINMVRKVLYDLFGK
SLITGIRVKDERKGWFVYRWRTRREEVEHFIESQKKKIEERLQQRLDYENASDFYHCGNE
DCPRVTFESALDGMFKCPSCGSVLNLKKNDKSKKAYSKKIDEIKKDMQQTF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttggtagacaaatacgaagatccttttgttagaatagcctccatgataggaggggatgaa
tacctcaaagtagcaagatcattactcaaagcagaagatgcaactgatgaagaaattgca
agctctactggtcttaggatcaacatggtaagaaaagtattgtatgatttgtttggaaaa
tccttaatcactggaatcagagtaaaagatgaaagaaaggggtggtttgtctacagatgg
agaaccagaagagaagaagtagagcattttattgaaagccagaaaaagaaaattgaagag
agattacaacaacgattagattatgaaaatgcttcagacttttatcattgtggtaatgaa
gactgccccagagttacatttgagagtgcacttgatggaatgttcaaatgcccatcatgt
ggaagtgttctaaacctaaaaaagaatgataaatctaaaaaagcatattcaaagaaaatt
gatgaaatcaagaaagatatgcagcaaacattctga
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integrated database retrieval system