Nitrosopumilus zosterae: NZOSNM25_000220
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Entry
NZOSNM25_000220 CDS
T08647
Name
(GenBank) exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NZOSNM25_000220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nzt03019
]
NZOSNM25_000220
Messenger RNA biogenesis [BR:
nzt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NZOSNM25_000220
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NZOSNM25_000220
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Motif
Other DBs
NCBI-ProteinID:
BDQ30127
LinkDB
All DBs
Position
complement(182971..183522)
Genome browser
AA seq
183 aa
AA seq
DB search
MSENATFPGDKIASIEEYEAGNNTFDDGDMVRAATIGEKDIDKTTRIASIKHPKLLSIPQ
VDDIVIGTVAAVMSSMIAVSIDYINGRPTTSKVECVCSTRNLRIRNVALVNDIVALKILN
HLNGTIHATISEPNLGVLFTKCRKCGGKVVPMRDAIKCTECAWIDERKLSSNFGNSDFIK
LRE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatgcgacatttccgggagacaaaatagcatctattgaagaatatgaggct
ggaaataacacctttgatgatggcgatatggtaagagcagcaaccataggtgaaaaagat
attgacaagacaacacgaattgccagtattaaacatccaaaacttctatcaattcctcaa
gtagatgacatagttattgggacagtcgcagcagtaatgtcatcaatgattgcggtttct
attgattacattaatggaagaccaactacatcaaaagtagaatgtgtttgttccacacga
aatttaagaataagaaatgttgcattggtaaatgatatagtagcattaaaaattctaaat
catcttaatggtacaattcatgcaacaattagtgaaccaaatttaggggttttatttaca
aagtgtagaaaatgtggtggaaaagttgttccaatgcgtgatgccatcaaatgtacagaa
tgtgcatggattgatgaaagaaaactttcttccaatttcggcaatagcgattttataaaa
ttgagagaataa
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integrated database retrieval system
