Nitrosopumilus zosterae: NZOSNM25_000271
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Entry
NZOSNM25_000271 CDS
T08647
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_000271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nzt03000
]
NZOSNM25_000271
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_000271
Transcription factors [BR:
nzt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
NZOSNM25_000271
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
NZOSNM25_000271
RNA polymerase III system
TFIIIB
NZOSNM25_000271
RNA polymerase I system
SL1/TIF-1B
NZOSNM25_000271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
BDQ30176
LinkDB
All DBs
Position
complement(236775..237338)
Genome browser
AA seq
187 aa
AA seq
DB search
MPQTKPIVSVENVVASASVDQKIDLNDITEKFPDTEYHPEQFPGLVFRLKSPRTATLIFR
TGKMVCTGAKSEEMAIKAVNTVVQKLRKGKIKIKKDAVITVQNIVAAINLGGKIHLEKAA
RTLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGAKKESDVYRSVHNLHALLEEK
NLMIYDQ
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaacaaaaccaattgttagtgttgaaaatgttgttgcttcagcatcagtagat
caaaaaattgatcttaatgatattacagaaaaatttccagatacagaatatcatcctgaa
caatttccaggactggttttcagattgaagagtcctagaactgcaacattgatttttaga
acaggaaagatggtgtgtactggtgcaaaatcagaagagatggcaatcaaagctgtaaac
acagttgttcagaaattaagaaaggggaaaatcaaaataaaaaaagacgcagtcattaca
gttcaaaacatagttgccgcaattaatcttggaggaaaaattcacttagaaaaagcggca
agaactttaccaagaagcatgtatgaaccagaacaattcccaggactaatacatagaatg
cttgatccaaaaacagtgatattgttatttgcatctggaaaattagtgtgtactggtgca
aaaaaagagtcagatgtttatcgttcagtgcataatttgcatgctttattagaagaaaaa
aatctaatgatttatgatcaataa
DBGET
integrated database retrieval system
