KEGG   Nitrosopumilus zosterae: NZOSNM25_000429
Entry
NZOSNM25_000429   CDS       T08647                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nzt  Nitrosopumilus zosterae
Pathway
nzt03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nzt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NZOSNM25_000429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nzt03021]
    NZOSNM25_000429
Transcription machinery [BR:nzt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NZOSNM25_000429
 Prokaryotic type
  Archaeal type
    TFB
     NZOSNM25_000429
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF HTH_AsnC-type Ribosomal_L37e Zn_ribbon_tTFIIB TetR_N Sigma70_r4 HTH_11 Cyclin_N DZR Zn_Ribbon_1 Phage_fiber_2 Ribosomal_S27
Other DBs
NCBI-ProteinID: BDQ30327
LinkDB
Position
353589..354494
AA seq 301 aa
MVSSNQNSSCMRCGKNSMLTDDTTGEQFCSKCGYVVSEKTQESGPEWRSFQKDGGADPAR
TGAPSSLLMHDMGLSTVINPLNKDASGKPLSTSMKSTIERLRTWDNRSQVHEPVDRNLRQ
ALGELTRLKDKIAISANVLEKAAYIYRKALEKKLVRGRSISAMIAASLYAACRDTATPRT
LKDVADAANVKRKDIARCYRLLHYELELKMPVVDSVQCIARISSKLDITEKTKRYAIKVL
KEAQEREESAGKDPMGLAASALYLSCVHNGASVTQRDIAEAAGVTEVTIRNRYKGLKASH
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atggtaagttcaaatcaaaactctagctgcatgagatgtggaaaaaactccatgttaact
gatgacactactggtgaacaattttgctcaaagtgcggttatgtggtttcagaaaaaacc
caggaatcaggccctgaatggagatctttccaaaaagatggtggtgctgatcctgcaaga
actggcgctccatcatcattactgatgcatgatatgggactgtccaccgttatcaaccca
ttaaacaaggatgcttctggaaaaccactttctacctcgatgaaaagtaccattgagcgt
cttagaacttgggataaccgaagtcaggttcatgagccggtagaccgaaacttgcgacag
gctcttggtgagttaactagactgaaagacaagattgcaatttctgcaaatgttcttgag
aaagcagcttacatttacagaaaagctttggagaaaaaacttgtacgcggtagatctatt
tctgcgatgattgctgcgtctctttatgctgcttgcagagatactgctacacctagaacc
ctcaaagatgttgcagatgctgcaaatgtaaaacgaaaagatattgcacgatgttataga
ttgttacattacgaattggaattaaagatgcctgtagttgattcagttcaatgtattgca
aggatttcaagcaaactcgatattacagaaaaaacaaagcgatatgcaattaaggtatta
aaagaagctcaggagcgtgaagagtcagctggaaaagatcctatgggtcttgcagcttcc
gcattatacttgtcctgtgttcataacggtgcgtctgtaactcaaagagatattgcagaa
gctgcaggtgttactgaagtcacaatacgtaacagatacaagggattgaaagctagccat
tcgtaa

DBGET integrated database retrieval system