Nitrosopumilus zosterae: NZOSNM25_000627
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Entry
NZOSNM25_000627 CDS
T08647
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nzt
Nitrosopumilus zosterae
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzt03016
]
NZOSNM25_000627
Enzymes [BR:
nzt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NZOSNM25_000627
Transfer RNA biogenesis [BR:
nzt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NZOSNM25_000627
Prokaryotic type
NZOSNM25_000627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF2200
SAM_BAF
Motif
Other DBs
NCBI-ProteinID:
BDQ30523
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All DBs
Position
528246..529442
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AA seq
398 aa
AA seq
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MIPNLDSQIGITVYSTNFSGIGGKIRAKPEDFHVSEIISDKVNKSITDQEGYAVYKLKKK
KIDTNHALSGIFRKKGIRLKSLGLKDASAITEQFVCSGNKGKAIEDFSTDKYSLEKIGYV
KKPLSKKDMIANHFKIKISDCSNDLSSFTEYDKVLNFYGYQRFGSKRPVTHLIGKAILQR
DFKKAVDLILSFTSSYDSKENTEIREKLSDKANFEKYFDQVPSQMDVEKIVLKEMIEHDD
YFAAIRAIPLSLRRFYIQAYQSFIFNQSLSMAFLDGENLFEAQPGDVCFDFNGIIGKYVK
GLDQRLALPFVGYSYYKKTRFDHQISKILSNEEITPKDFFLKEMQEVSNEGGFRQAALHC
FDYSSQGNTVEFSLSRGMFATILLREIMKPEDPMTAGF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgatacctaatctggattcccaaattggaatcaccgtttacagcactaatttttctgga
ataggaggaaaaattcgagccaaacccgaagatttccatgtgtctgaaattatttctgac
aaagtaaacaaatccataactgatcaagaaggctatgccgtatacaaattaaaaaagaaa
aaaattgataccaatcatgccttatctggtatttttagaaaaaaaggaattcgcttaaag
tcacttggactaaaggatgcatcagctataaccgaacaatttgtctgctctggaaataag
ggcaaggccattgaggatttctctactgacaaatattctttggaaaaaattggctatgtg
aaaaaacccctgtctaaaaaagacatgatagcaaatcattttaaaattaaaatctctgac
tgctcaaacgatttgtcttctttcactgaatatgacaaagtcttgaatttttacggttac
cagagatttggttccaaaagacccgtaactcatctgattggcaaggccattttacagcga
gatttcaaaaaagctgttgatttgattttgtcttttacctcttcatatgattcgaaggaa
aatactgagattcgtgaaaaactatcagacaaggcgaactttgaaaaatattttgatcaa
gttccaagtcaaatggatgttgaaaaaattgttctaaaagaaatgattgaacatgacgat
tattttgccgcaattagagcaatcccattatctttaagacgattctacatccaagcgtat
caatcttttatttttaatcagtctctaagtatggcatttttagatggtgaaaatcttttt
gaggctcaaccaggtgacgtgtgttttgattttaatggaataattggcaagtatgtgaaa
ggcctggatcaacgattggcattgccttttgtaggttattcatattacaaaaaaacaaga
tttgatcatcaaatatctaaaatattgagtaacgaggaaattacaccaaaggattttttc
ctcaaagagatgcaagaagtaagcaatgagggtggctttagacaggctgccttgcattgc
tttgattattcgtctcaaggaaatactgtggaattctctctctcacgcggtatgtttgca
acaatcttgttaagggaaattatgaaacctgaggatccaatgactgccggtttttga
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