Nitrosopumilus zosterae: NZOSNM25_000726
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Entry
NZOSNM25_000726 CDS
T08647
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NZOSNM25_000726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nzt03400
]
NZOSNM25_000726
DNA repair and recombination proteins [BR:
nzt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NZOSNM25_000726
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NZOSNM25_000726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND3
RsgA_GTPase
nSTAND1
AAA_21
AAA_25
AAA_22
AAA_23
AAA_14
NB-ARC
AAA_33
Viral_helicase1
ATPase_2
cobW
DnaJ_CXXCXGXG
MeaB
Septin
Motif
Other DBs
NCBI-ProteinID:
BDQ30620
LinkDB
All DBs
Position
608066..610891
Genome browser
AA seq
941 aa
AA seq
DB search
MVETKLKIRGARHHNLKNLDIDIPKNKLVVISGLSGSGKSTLAFDTIYAEGQRRYVESLS
AYARQFLEMMDKPDVDSIEGLSPAISIQQKTTSKNPRSTVGTTTEIYDYMRLLYARIGIP
YCTNCGRKVSTQSVERICDSVLKDFSGKKILILAPIIQRKKGTYEKLFEQIKKDGYSRVR
INGEILSLDDEIPPLDRQKWHNIEIIVDRITSEKSERSRLFEAIQTAIKASKGDVMIATD
KDEKIFSQNNACPYCGLTVGELEPRSFSFNSPFGMCKTCNGLGVKMEFDADLVIPDKTKS
ILDGAIVPWSGRFSSFRRQALRAVGMKFGFDLMTPLEKIKPKHFDIILHGTSDLIDFKYR
SKSGDSSWQYTDAFEGVLVNLQRVFMETDSESKREWLKQFMRDTPCNSCDGKKLKPESLA
VKINEKGIMDVCDMSIDHCYDFFSTLKLTENEQYIAKDVLKEIKERLEFLMNVGLNYLSL
NRLSSTLSGGESQRIRLATQIGSNLTGVLYVLDEPTIGLHQRDNARLIKTLNKLRNLGNS
VIVVEHDEEVIRNSDWIVDLGPGAGVHGGNVVFEGTVDKILNGSNSVTGAYLKDNSLIAL
KNKIRNRSGSLIIRKASENNLKDIDVEIPLGFFVSVTGVSGSGKSTLINDVLLKTLESHF
YKTNVRPGNHKEIVGLENIDKVIAIDQSPIGRTPRSNPATYIGAFTPIRELYANTELSKE
RGYAPGQFSFNVADGRCFACDGDGVKQIEMQFLSDVYVKCDECKGKRYNTETLSVLYKGK
NISDILDMTVYEALNFFENIPSIKRKLQTVYDVGLGYVKLGQSSTTLSGGEAQRVKLASE
LSKRGTGKTLYILDEPTTGLHFADVQKLLDVLNRLVNLGNTVVVIEHNMDVIKNSDWVID
LGPEGGDEGGKIVASGTPHDLAKAPGSYTGKFLKKLLKNDF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaactaaactaaaaattcgaggagcacgacatcataatctaaaaaatctagat
attgatatcccaaaaaacaaactagttgtaattagcggattatccggatctggaaaatcc
acattggcttttgatacaatttatgctgagggtcaaagacggtatgttgaatctctctca
gcatacgctcgtcaatttttagaaatgatggataaacccgatgttgattccattgaagga
ttatctcctgcaatttctattcaacaaaaaaccaccagcaaaaatcctcgttctactgtg
ggtacaactactgaaatttatgattatatgcgattactttatgcaagaattggtatcccg
tattgcacaaattgtggaagaaaggtgtcaacacaatcagtcgagcgaatatgtgattct
gtcctaaaagacttttctgggaaaaagatcttgattttagcccctatcattcaaagaaaa
aaaggaacatatgaaaaattatttgaacaaatcaaaaaagacgggtattctagagtacgc
ataaatggagaaattttgagcctggatgatgaaattcctccacttgaccggcaaaaatgg
cacaatattgaaattattgttgatagaataactagtgaaaaatctgaacgctcccgactc
tttgaggcaattcaaactgccattaaagcatcaaaaggagatgtgatgattgcaactgac
aaggatgaaaaaatcttctcgcaaaataatgcatgtccatattgtggattaacagtaggc
gaattagaaccacgctcgttttcatttaattccccgtttggaatgtgtaaaacatgtaat
ggattgggtgtaaagatggagtttgatgctgatttagtaattcctgataaaacaaaatca
attttggatggagcaatcgttccttggagtggaagattctcttcctttagaagacaagca
ttaagagcggttggaatgaaatttggttttgatttgatgactcccttggaaaaaattaaa
ccaaaacattttgatattattttacatggcacatctgatttaattgattttaaatatcgc
tccaaatctggcgattcttcttggcaatataccgatgcatttgaaggtgtacttgtaaat
cttcagcgggtttttatggagactgactctgaatcaaaaagagagtggttaaagcaattc
atgcgtgacactccatgcaattcatgtgatggtaaaaaattaaaacctgaatcacttgca
gtcaaaattaatgaaaaaggaataatggatgtttgcgatatgtccattgatcattgttat
gattttttttctactctaaaattaactgaaaacgaacaatacattgcaaaagatgttctc
aaagagatcaaagaacgtctggaatttttgatgaatgtgggattgaattatttatcatta
aacagattaagctcaacattatctgggggtgaatctcaaagaattagattggcaacacag
ataggctctaacctgactggtgttttgtatgtgcttgacgaaccaacaattggactacat
caacgtgataatgctagactaattaaaacgctaaacaagctacgaaatcttggaaattca
gtcatagttgtggagcatgacgaagaagtaatacgaaattcagactggattgtggatttg
ggacctggcgcaggagttcatggcggaaacgtggtttttgaaggaacagttgataaaatt
ctaaatggcagcaactctgtcactggtgcatatttgaaggataattctctgattgcgttg
aaaaataaaattcgtaatcgctctggttcattaattattagaaaagcatcagaaaacaat
ctcaaagatattgatgttgaaatccctttggggttttttgtatccgttactggtgtttca
ggttctggaaaatcgactttgattaatgacgtactgcttaaaacactggagagtcatttt
tacaaaacaaatgtcaggcctggcaatcacaaagagattgttggtttagagaatattgat
aaagttattgcaattgatcaatcgccaattggtagaacgccacgttcaaatcctgcaaca
tacattggtgcatttactcctattagagaactatatgcaaatactgaattatcaaaagaa
cgcggctatgctcctggacaattttcatttaatgtggccgatggacgatgttttgcatgt
gatggagatggcgttaaacaaattgaaatgcaatttttgtctgacgtttatgtaaaatgc
gatgagtgtaaaggaaagagatacaacaccgaaacattatctgtgctgtacaagggtaaa
aacatctccgatattttagacatgactgtctatgaggcattaaatttctttgagaatatc
ccatcaattaaacgaaaactacaaacagtttatgatgttgggctaggttatgtcaaacta
ggccaatcatctacaacactttctggcggagaagctcaaagggtaaaacttgcgtctgaa
ctctcaaagagaggtactgggaaaactctctatattctggatgaaccaacaaccggattg
cattttgctgacgttcaaaaactacttgatgtccttaatcgattggtaaatttaggaaat
actgtggttgtcattgagcataatatggatgtgatcaaaaattctgattgggtgattgat
cttggacctgaaggaggtgatgaaggagggaaaattgttgctagtggtacccctcatgat
ttggcaaaggcacctggaagttatactggaaagtttctgaaaaaactattaaaaaatgac
ttttga
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