Nitrosopumilus zosterae: NZOSNM25_000888
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Entry
NZOSNM25_000888 CDS
T08647
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_000888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_000888
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NZOSNM25_000888
Prokaryotic type
Archaeal type
TFB
NZOSNM25_000888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_RRN7
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Ribosomal_S27e
Zn_ribbon_IS1595
Lar_restr_allev
HscB_4_cys
DUF4503
Trm112p
TerY_C
A2L_zn_ribbon
RB_B
Zn_ribbon_LysW
HEF_HK
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BDQ30780
LinkDB
All DBs
Position
complement(756684..757595)
Genome browser
AA seq
303 aa
AA seq
DB search
MLKNTMISGPKCPSCGNKKMVTDQDTGELFCSKCGIVVTDKIADTGAEWRSFSNDETNRT
RVGAGTSLTMHDMGLSTVIGAANKDSTGKPLSASVKSSIERLRTWDSRTQAHSSADRNLR
QALNEMDKLKDKLALTDAVVEKAAYIYRKAMERKLVRGRSIQGLVAACLYASCRNTETPR
TLDDIAKGINIRRKDVARCYRLIFRELELKMPVVDPVKGVSRIASIAELSEKSKRKAIEI
LNQAKKIGMVAGKDPMGIAAAALYLACISTGEVKSQKDISVASGVTEVTIRNRCAGLRKM
LND
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaatacaatgatctcaggaccaaaatgcccatcttgcggaaataaaaaaatg
gtcactgatcaagatacaggtgaattgttttgtagtaaatgtggaattgtagttactgac
aaaattgcagatacaggtgcagaatggcgttcattttcaaatgatgagacaaatagaacc
agagtgggagcaggaacatcattaacaatgcacgatatgggattatccacagtaattggc
gcagctaacaaagattctacaggaaagccattatctgccagtgtaaagagttcaattgaa
agactcagaacttgggatagtagaacacaagcacattcatctgcagacagaaatctaaga
caagccctcaatgaaatggataaattaaaagacaaacttgcattaactgatgcagtagtt
gaaaaggcggcttatatttacagaaaagcaatggagagaaaactagttcgaggccgttca
attcaaggattagttgcagcatgtctttatgcatcatgtagaaacacagaaacgcctaga
acattagatgatattgcaaaaggaatcaacataagaagaaaagatgttgccagatgctat
agattaattttcagagaattggaattgaaaatgccggtagtggatcctgttaaaggagtg
tccagaattgcaagcattgcagaattaagtgagaaaagcaaacgaaaggcaattgaaatt
ttaaatcaagcaaaaaaaataggcatggttgcaggaaaagatccaatgggaattgcagca
gcagcgctttatctagcttgtattagtacaggggaagtaaaatcccagaaagatatctct
gtagcatcaggagtaacagaagtcaccataagaaacagatgtgcaggattaagaaaaatg
ctcaatgattga
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