Nitrosopumilus zosterae: NZOSNM25_000909
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Entry
NZOSNM25_000909 CDS
T08647
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_000909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_000909
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NZOSNM25_000909
Prokaryotic type
Archaeal type
TFB
NZOSNM25_000909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_N
RB_B
Motif
Other DBs
NCBI-ProteinID:
BDQ30801
LinkDB
All DBs
Position
complement(775491..776354)
Genome browser
AA seq
287 aa
AA seq
DB search
MLSDDVTGERFCGKCGFVISETLQDSGPEWRSFSKDGGTDPTRTGAPTSLAMHDRGLATI
ISPMNKDASGKPLSTSMKSTIERLRTWDSRSKVNASADKNLRQALSQLSTLKDKLSLSDS
VIEKASYIYRKALEKGLVRGRSISALIAAALYAACRDTETPRTLKDVADAGNIKKKDISR
CYRILHQELELKMPVVNPVQCIARISSKLDISEKTKRYAAKVLQIARDHEESAGKDPMGL
AAAALYLSCVKNGEDRTQRDIAEASNVTEVTIRNRYKGLRLDQDTEI
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagatgatgttacaggagaaagattttgtggcaaatgtggatttgtaatttca
gagacacttcaagattctggacctgaatggaggtcattttcaaaagatggtggaacagat
ccaacaagaacaggggctccgacatcacttgcaatgcatgatagaggactcgccacaatt
attagtccaatgaacaaggatgcatctgggaaacctctttctacatccatgaagagcacc
attgaaaggctgagaacttgggatagtagaagcaaggtaaatgcatctgcagataagaat
ctcagacaagcgctaagtcagttatcaacattaaaagacaaattatcactttcagattca
gtaattgaaaaagcatcttacatttacagaaaagcattagaaaaaggactagttagaggt
cgttcaatttcagctttaattgcagcggcactttatgcagcttgtagagacactgaaacc
cctagaactctgaaagatgttgcagatgcaggaaacataaagaaaaaagatatttcacgg
tgttacagaatattacatcaagagttagagctaaaaatgcctgtggtaaacccggttcaa
tgcattgcaagaatttcaagcaaactggatatttctgagaaaactaaacgttatgcagct
aaagttcttcagattgctcgggatcatgaggaatctgcagggaaagaccctatgggatta
gcagcagctgcgttgtacctctcatgtgtaaaaaatggtgaggacaggactcaaagagac
attgcagaagcctcaaatgtgacagaagtgaccattagaaatagatacaaaggtctcaga
ttagaccaagatacggagatatag
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