Nitrosopumilus zosterae: NZOSNM25_000918
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Entry
NZOSNM25_000918 CDS
T08647
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_000918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_000918
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NZOSNM25_000918
Prokaryotic type
Archaeal type
TFB
NZOSNM25_000918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
HTH_AsnC-type
HTH_Crp_2
HTH_11
ORC6_2nd
HTH_3
RB_B
Ribosomal_L37e
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
BDQ30810
LinkDB
All DBs
Position
781883..782803
Genome browser
AA seq
306 aa
AA seq
DB search
MVTANQNSLCLRCGKKSMLSDDVTGERFCGKCGFVISETLQDSGPEWRSFSKDGGTDPTR
TGAPSSLMIHDMGLSTVINPINKDASGKPLSTSMKSTIERLRTWDSRSQVHEPIDRNLRQ
ALSDLNKLKDKVAIPANVLEKASYIYRKALEKKLVRGRSIAAMIAAALYAACRDTETPRT
LKDIADAANVKRKDIARCYRLLHHELELKMPVVDSIQCIARISSKLDISEKTKRYAVKVL
KDAQERKESAGKDPMGLAATALYLSCVHNGVSITQRDLAEAAGVTEVTIRNRYKGLKADQ
TTKSEI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagcaaatcaaaattctctttgtttacgttgtggaaagaaatctatgttatca
gatgatgttacaggagaaagattttgtggcaaatgtggatttgtaatttcagagacactt
caagattctggacctgaatggaggtcattttcaaaagatggcggaacagatccaacaaga
acaggggctccgtcttcactgatgattcatgatatgggattgtccacagttattaatccg
ataaacaaggatgcatctgggaaacctctttctacatccatgaagagcaccattgaaagg
ctgagaacttgggatagtagaagtcaagttcacgagcctattgatagaaatttgagacaa
gctcttagtgatttaaataaattaaaagacaaggttgccattcctgcaaatgttcttgaa
aaagcatcatatatttacagaaaggctttggagaagaaacttgtccgcggaagatctatt
gccgcaatgattgcagcggcactttatgcagcttgtagagacactgaaacccctagaact
ctgaaagatatagcagatgctgcaaatgtcaaacgtaaagatattgcgcgctgctatcga
ttactacatcatgagttagagctaaaaatgcccgtggtggattcaatccagtgcatcgca
agaatttcaagcaaactggatatttctgagaaaactaaacgttatgcagttaaagtgcta
aaggatgcacaagaacgcaaagaatctgcagggaaagaccctatgggattggctgcaact
gcattatacctatcctgtgtacataatggggtgtctatcactcaacgggatcttgcagaa
gctgctggcgtcacagaggttacaataagaaatcgatacaagggtctaaaagcagaccaa
acaacaaaatctgaaatttaa
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