KEGG   Nitrosopumilus zosterae: NZOSNM25_000967
Entry
NZOSNM25_000967   CDS       T08647                                 
Name
(GenBank) DNA-directed RNA polymerase subunit K
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
nzt  Nitrosopumilus zosterae
Pathway
nzt03020  RNA polymerase
nzt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nzt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NZOSNM25_000967
  09124 Replication and repair
   03420 Nucleotide excision repair
    NZOSNM25_000967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nzt03021]
    NZOSNM25_000967
   03400 DNA repair and recombination proteins [BR:nzt03400]
    NZOSNM25_000967
Transcription machinery [BR:nzt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NZOSNM25_000967
  RNA polymerase III system
   RNA polymerase III
     NZOSNM25_000967
  RNA polymerase I system
   RNA polymerase I
     NZOSNM25_000967
DNA repair and recombination proteins [BR:nzt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NZOSNM25_000967
SSDB
Motif
Pfam: RNA_pol_Rpb6 CC_BshC YqzH
Other DBs
NCBI-ProteinID: BDQ30859
LinkDB
Position
complement(825957..826478)
AA seq 173 aa
MSDVEEAPLLESPESEEPFLESTESEEIEVSPEENTGLNKALDTYRKLIEKKGGLEPLSE
KEQENLEKRIKEIESREVVETVEEHEATEIPCEKGKITIGPPTLTRFEKARIMGARALQL
SLGAPPFIPIPKTARISLDIAMEELEQRVIPITIRRVLPNGDFQNIPIDYFEK
NT seq 522 nt   +upstreamnt  +downstreamnt
ttgtctgatgtcgaagaagcaccactgttagagtcacctgaatctgaagaaccattttta
gaatcaacggaatctgaagaaattgaagtatcaccagaagaaaatactggattaaacaaa
gcgcttgacacttatcgaaaattaattgagaaaaaaggtggccttgaaccactaagcgaa
aaagaacaagagaatcttgaaaagagaatcaaagaaatagaaagcagagaagttgtagaa
acagtagaagaacacgaagcaacagaaattccatgcgaaaaaggcaaaattacaatcggc
cctccaacgcttacaagatttgaaaaagcaagaattatgggtgcaagagctttgcaatta
tcactaggcgcaccaccattcatcccaattccaaagacagctagaatttcattagatatt
gcaatggaggaacttgaacagagagtgattccaattacaattcgaagagtactcccaaac
ggagattttcaaaatatcccaattgattactttgaaaaatga

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