Nitrosopumilus zosterae: NZOSNM25_001391
Help
Entry
NZOSNM25_001391 CDS
T08647
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_001391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nzt03000
]
NZOSNM25_001391
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_001391
Transcription factors [BR:
nzt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
NZOSNM25_001391
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
NZOSNM25_001391
RNA polymerase III system
TFIIIB
NZOSNM25_001391
RNA polymerase I system
SL1/TIF-1B
NZOSNM25_001391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
BDQ31278
LinkDB
All DBs
Position
1164424..1164984
Genome browser
AA seq
186 aa
AA seq
DB search
MPQTKPIVSVENVVASASVDQKMDLNEITKTFPDVEYHPDQFPGLVFRLKTPKTATLIFT
SGKMVCTGSKSEEMARKAVKTVVQKLRKGGIKVKKDATVQIQNIVASINLGGKIHLEQAA
RTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKQEPDVYRSVNNLHALLEEK
NLMIYD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaacaaaaccaattgtaagcgtggaaaacgttgtagcctcagcttctgtagac
cagaagatggacttgaatgagatcactaaaacatttccagatgtagaatatcaccctgat
caatttccaggactagtttttagattaaagacaccaaagacggctacattgattttcact
tcaggcaaaatggtatgtactggttccaaatctgaagagatggcgagaaaggcagtaaag
acagttgtgcaaaaacttcgaaaaggcggaattaaagtaaaaaaagatgcaactgtacaa
attcaaaatattgtagcatctattaatctaggtggaaaaattcatttggagcaagcagca
agaacattgcctagaagcatgtacgaacctgagcaatttccaggacttattcacagaatg
ttagatccaaagacagtgattttgttattttcatcaggaaagcttgtctgcacaggagct
aaacaagaaccagacgtttacagatcagttaacaacttgcacgcattactagaagaaaaa
aacctaatgatttatgattaa
DBGET
integrated database retrieval system