Nitrosopumilus zosterae: NZOSNM25_001498
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Entry
NZOSNM25_001498 CDS
T08647
Name
(GenBank) transcription factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_001498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_001498
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NZOSNM25_001498
Prokaryotic type
Archaeal type
TFB
NZOSNM25_001498
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Auto_anti-p27
Cys_knot
Cyclin_C
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
BDQ31383
LinkDB
All DBs
Position
1242733..1243689
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AA seq
318 aa
AA seq
DB search
MNILEKQNCPECKSTLVDDMQNGEIICSGCGVVVDDQISDYGPETISSNFEDKMKLARAT
GQTTYSQHDLGITTEISISAKDFSGKTINREVANQMHNLRKWQQRVRVSSPKERRLANVL
TKMGETCDSLNLSKNVLETASMIYRNLDGHVDVKGKSVVSITAATIYMACKQCDVVRSLE
EICRGVCPPKDVKSKTKLAARYYRTMVMEMGHLTAPVVTMDKYISKIANMTQTEVRVERL
ALEIAEKTKDSSIADGKAPNGIAAAYLYVASVLLGQNVLQRDVSSIAGVTEVTIRNRCKE
ILTCYKLKITLRPSLAKY
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacatactagaaaaacaaaactgtcctgaatgtaaatctacattagtagacgacatg
cagaatggtgaaatcatctgttctggttgcggcgtagtagtcgatgatcagatatcagat
tacggtccagaaactattagctcaaatttcgaagacaaaatgaaattagcaagagctacg
ggacaaacaacttattcccaacacgatttgggaataacaactgagatttcaatcagtgca
aaagactttagcggaaaaacaatcaaccgtgaagttgcaaatcaaatgcacaatctcaga
aagtggcaacaaagagttagagtttcctcaccaaaagagagaagacttgcaaatgtatta
acaaagatgggagaaacatgcgatagtcttaatctttcaaaaaacgtgttggaaaccgct
tctatgatatacagaaacttggacggacatgttgatgtgaagggaaaatcagtagtcagc
ataactgcagctacaatttacatggcatgcaagcaatgtgatgtagtaagatcactagaa
gaaatttgtcgcggagtttgtccaccaaaagacgtaaaatccaaaacaaaacttgcagca
agatactatagaaccatggtaatggaaatgggacatttaacagccccagttgtaaccatg
gacaaatacatctcaaagatagcaaacatgacacaaactgaggtcagagttgaaagactg
gccttggaaattgcagaaaaaacaaaagatagcagcattgcagatggaaaagctccaaat
ggaattgctgcagcatatctatatgttgcatcggtattacttggacaaaatgttctacaa
agagacgtttcaagtattgcaggagtaacagaagtcactatcagaaatagatgtaaagaa
attctaacatgctacaaactcaaaattactttaagaccatctctggccaaatattaa
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