Nitrosopumilus zosterae: NZOSNM25_001557
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Entry
NZOSNM25_001557 CDS
T08647
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_001557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_001557
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NZOSNM25_001557
Prokaryotic type
Archaeal type
TFB
NZOSNM25_001557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_11
Zn_ribbon_tTFIIB
GntR
HTH_AsnC-type
HTH_28
HTH_36
Zn_Ribbon_1
Sigma70_r4_2
DZR
HTH_DeoR
Trm112p
Rota_NSP3
Baculo_ME53
Ribosomal_S27e
DUF5817
Motif
Other DBs
NCBI-ProteinID:
BDQ31438
LinkDB
All DBs
Position
complement(1291559..1292488)
Genome browser
AA seq
309 aa
AA seq
DB search
MPILQKITKENVFCNYCHASKLVTDEVTGEIACSNCGYVILENTEERGREHRLISDTGDT
ARTGPGLTLKRHDQGLNTVIGIQNKDAVGKPLSSKTTQMFDRLRKWDSRSQTKNSADRNL
RFALQEFDKVQSKLGLSDTVIERASLFYRKAIERNLIRGRTVKSIAAACLYASCRDLGHN
RTLIEIANQFLINRKEIARAYRILFRELGFVVSIADPIKSITKIASKMNVSEKTIRKAVQ
ILDAAQDARITAGKNPEIIAATVIYAASIITGESMSQTAIAEAAGTSTVSIRNRIQEFKA
KLGLFSTIN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgccaattttacaaaaaatcacaaaagaaaatgtattttgcaattattgtcatgcttcc
aaattagtgactgacgaggttaccggtgagattgcatgttctaactgcggatatgttatt
ttagaaaatacagaggaacgaggcagagaacatagactcatttcagacacaggggacacc
gctaggacaggacctggattgacactaaaaagacatgatcaaggattaaacacggtaatt
ggaattcaaaataaagatgcagtaggaaagcccctctcctcaaaaaccactcaaatgttt
gacagactacgaaaatgggacagtagatcacaaacaaaaaattctgcagacaggaatctt
cgatttgcacttcaagaatttgacaaagtacaatcaaagttaggcctttctgatacagta
attgagcgagcatcgcttttttacagaaaggcaattgagagaaaccttattcgtggtaga
actgtaaaatcaatagctgctgcatgtttgtatgcatcatgcagagatttaggacacaat
agaacattaatagaaattgcaaatcagtttttgattaacagaaaagagattgccagagca
taccgcatattgtttagagaattaggatttgttgtatctattgctgatccaataaaatcc
atcaccaagatagcaagtaagatgaatgtatcagagaaaacaatccgtaaagcagtacaa
atcttagatgcagcccaagatgcaagaattacagctggtaaaaatcctgaaattattgca
gcaactgtgatctatgctgcatccattattacaggcgaatcaatgtctcaaactgcaata
gcagaagctgcaggaacaagtacagtttcaataagaaatagaattcaagagtttaaagca
aaactaggtcttttttccacaattaactag
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