Nitrosopumilus zosterae: NZOSNM25_001570
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Entry
NZOSNM25_001570 CDS
T08647
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nzt
Nitrosopumilus zosterae
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzt03016
]
NZOSNM25_001570
Enzymes [BR:
nzt01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NZOSNM25_001570
Transfer RNA biogenesis [BR:
nzt03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NZOSNM25_001570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
EF-hand_SWAP70_N
Motif
Other DBs
NCBI-ProteinID:
BDQ31451
LinkDB
All DBs
Position
complement(1302460..1303023)
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AA seq
187 aa
AA seq
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MDDTPIVNGEMISDQACISDKSLIHELELKGYGEIENEKLFLKQFETLYLLYTKRLILKK
IKKQIDFDTFMNICQKTDSDILTKFLIYRDLRNRGYVVKDGFGFGSDFRVYERGHFGEKG
AKYLVFGLNEGQQEKMGNLQKKIEDITHMGKEPIIAVIDRRGEVIYYKINRMNFYENKAR
LEESFQL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggatgatactcctatagttaatggtgagatgatttctgatcaagcttgcatttctgat
aaaagtttgattcatgaacttgaactaaagggatatggagaaattgaaaatgaaaaacta
ttcttgaaacaatttgagactctgtatctgttatacactaaacgactgattttaaaaaaa
atcaaaaaacagattgattttgatacttttatgaacatttgccaaaaaactgattctgac
atacttactaaatttttgatatatcgtgatcttcgaaatagaggatatgttgttaaagat
gggtttgggtttggttctgactttagagtttatgaaagaggccattttggtgagaaagga
gcaaaataccttgtctttggactcaacgaaggtcagcaagagaagatgggtaatctacaa
aaaaagattgaagatatcacccatatgggcaaagaaccaataattgcagttattgatcgt
cgtggtgaagtgatctattataaaatcaacagaatgaatttctatgaaaataaagctaga
ttagaagaatcttttcaactctag
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