Nitrosopumilus zosterae: NZOSNM25_001632
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Entry
NZOSNM25_001632 CDS
T08647
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nzt
Nitrosopumilus zosterae
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzt03016
]
NZOSNM25_001632
Enzymes [BR:
nzt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NZOSNM25_001632
Transfer RNA biogenesis [BR:
nzt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NZOSNM25_001632
Prokaryotic type
NZOSNM25_001632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
LRR_9
Motif
Other DBs
NCBI-ProteinID:
BDQ31511
LinkDB
All DBs
Position
complement(1350708..1351709)
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AA seq
333 aa
AA seq
DB search
MTLKQLENLIEIDQDITDDAYGTPYDKRTLEQLLNYGVILLDKPPGPTSHETVAWAKRIL
KLPKIGHSGTLDPQVSGVLPLGLGEATKALGVLLLGPKEYVALGRVHSLPSKEKLSEIIN
LFKGEIFQKPPQRSAVVRQTRTRTIYEFELIEQKERLLLTRVLCEAGTYIRKLYYDIGEI
LGPGATMIELRRTRVDQFYETDGLVTLHELANAFALWEENKDETRLMQMIKPVEYALSEL
KSVVIRDSAVDAMCHGAQLAIPGVLKISPNLKKGDLVGIYTQKGEAVALAESTMSEEEIR
DATKGYAFETKRIIMAPNTYPKKWRTKPTHSKD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaaacaacttgaaaatctaattgaaattgatcaggatataactgatgatgca
tatggaacaccatatgacaaaagaacacttgaacaattactaaactatggtgttatttta
ctagacaaacctcctggtcctacaagtcatgagactgtggcttgggcaaaacgaattttg
aaacttcccaagattggtcacagtggaacacttgatcctcaagtatcgggagtattgcca
ttaggattaggtgaggcaacaaaagcactaggagttttacttttgggtcctaaagaatat
gttgcattaggacgagtgcattctcttccttcaaaggaaaaactttcagaaattattaat
ttgtttaaaggagaaatttttcaaaaacccccacaacgttctgcagttgtgagacaaaca
agaacaagaactatctatgaatttgaattaatcgagcaaaaagaaagactgctcttgact
cgagtcttgtgcgaagctggaacctatattagaaaattatattatgatataggagaaatt
cttggacctggagctacaatgattgagcttcgaagaaccagagtcgaccaattttatgaa
actgatggcctagtaacccttcatgaactagcaaatgcatttgcactatgggaagaaaac
aaagatgaaacaagattaatgcaaatgataaagccagtagaatatgcactaagtgaacta
aaatcagtagtaattcgtgattctgcagtagatgcaatgtgccatggtgcacaacttgca
attcctggtgttttgaaaatttctcctaatctaaaaaagggagatcttgttgggatttac
acgcaaaaaggtgaggcggttgctttggctgaatctacaatgtctgaagaagagattcgt
gatgcaacaaagggatatgcatttgaaacaaagagaatcatcatggctccaaatacatat
cctaaaaaatggagaacaaaaccaactcattcaaaggattaa
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