Nitrosopumilus zosterae: NZOSNM25_001694
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Entry
NZOSNM25_001694 CDS
T08647
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NZOSNM25_001694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_001694
Enzymes [BR:
nzt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NZOSNM25_001694
Transcription machinery [BR:
nzt03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NZOSNM25_001694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF5667
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
BDQ31572
LinkDB
All DBs
Position
complement(1399393..1403184)
Genome browser
AA seq
1263 aa
AA seq
DB search
MSLQAIKSIDGIRFSVWSPTEVRKYSVAEITAPETYDEDGMPVQGGLMDGRLGTLEPGQK
CLTCGNTAARCPGHFGHIELAEPILHIAFIDNIYKLLQSTCRSCARLKVPQEDLDEFKKI
KDKHAAYTVISQKRIPEQIIEKAKKAKECPHCGKTQYELVFTKPTIFVEKTEIGEHRLLP
ITIRERFSQILDEDLLLLSYDPITARPEWFILQALPVPPVTVRPSIILETGIRSEDDLTH
KMVDIIRVNQRLKESKEAGTPPLIVQDLVDLLQYHSTTYFDNEVSGIPQAHHRSGRPLKT
LTQRLKGKEGRFRGSLSGKRVDFSSRTVISPDPNLDLSEVGVPEQVAMKLTIPEIVTEWN
IERMRKLVINGPEKFPGVNYIVRPDGVKIRLDFVEDRSTIAETLEIGYLIERHLADGDIV
MFNRQPSLHQMSIMAHYVRVLPGKTFRLHPSVCPPYNADFDGDEMNLHVPQSEEARAEAI
LLMRVQDQLISPRYGGPIIGALRDFVTGAYLLTKDETTLSIQDFSNLAMLGGYKDALPKP
ATKTKDGPAYTGKQLFSLFLPKDFNYVLTSKWSKGTNGPAKDVVIKNGELISGVIDKTSI
GAEEPESVLHRITKDYGNAVGKNFLNSILIMVKQFITSYGFSYGFGDLEVPEKDKQQILN
DIQETYDIVSDLTNQYEKGTLKLTRGMRPEEALEAYIVNELGKARDKAGSTANNSLDNSN
AGKIMATTGARGSSLNVGQMAGALGQQSRRGNRLHDGYHNRALTHFQEHDNNPDAHGFVK
SNYREGLSALEFFFHAMGGREGLVDTAVRTQQSGYMQRRLINALEHIRLEYDGTVRDPHG
HIVQFLYGEDGIDVAKSDHGEAFNAHRLAESQTMIDSGKKATKDEIDTMIKKYTKTFSPR
LTSLVSEALHESNLSKDGVEAVCKKGLLLYNKAKVEPGQAVGIITAQSIGEPGTQMTLRT
FHFAGIKERNVTLGLPRLIELVDARKKPVTPTMDIYLDNESKKSREKAIEVARNVLQTKI
SALIANSETDYSTEIKLILSENRLKERGCSIAEVEASLASNKKFKMETVGELITLKLVEE
SDTATVIAIRNKVLNTTVKGVPDIERVTLVQKDDEWVIQTTGSNIAKVLEVKGIDKTNVR
TNNVFEIAGTLGIEAARNALIDELNHTLGDQGLEVDNRYIMLVSDLMCSRGYMQQIGRHG
IAGTKDSVLARAAFEITVPTIAHAALGGEIEQLKGITENVIVGSNIPIGSGTVDLYMQVS
KKK
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcaagctatcaaatcaatcgatggaatccgtttttccgtatggtctccaacc
gaagttcgaaaatattctgttgctgaaattactgcacctgaaacatatgatgaagatgga
atgccagttcaaggaggtcttatggatggaagactcggtacacttgaaccaggacaaaaa
tgtttaacttgtggaaatactgctgctagatgtcctggacattttggacatattgaactt
gcagagccaattttacatattgcatttattgataacatctacaaactattacaatcaaca
tgccgttcttgtgcaagactcaaagtaccacaagaagatttagatgaattcaaaaaaatc
aaagacaaacatgctgcatacactgtaatttctcaaaaacgtatcccagaacaaattata
gaaaaagcaaagaaagcaaaagaatgtcctcattgtggtaaaacccaatacgaattagtc
tttacaaaaccaaccatcttcgttgaaaaaacagagattggtgaacatagattacttcca
attacaattagagaaagattttcacaaattcttgatgaagatttgcttcttttatcctat
gatccaattactgcaagacctgaatggtttattcttcaggcattgcctgtcccacctgta
actgtaagaccatcaatcattcttgaaacaggaattagatctgaagatgacttgacacac
aaaatggtagacatcattagagttaatcaaagactaaaggaaagcaaagaagctggaact
ccaccactaattgttcaagacttggttgatctgctacagtatcattctacaacatatttt
gataatgaagtttctggaattcctcaagctcaccatcgttctggacgtccactcaaaaca
ttaactcaaagactcaaaggaaaagaaggcagatttagaggctcattatctggaaagaga
gtcgacttttcaagcagaactgtaatttcacctgatcctaacttggatttgtctgaagtt
ggagttcctgagcaagttgctatgaaactaacaattcctgaaatcgttacagagtggaat
attgaaagaatgcgaaaacttgtaattaatggacctgagaaattccctggtgtaaactat
atcgttagacctgacggtgttaaaattagattagactttgtagaagatcgttctaccatt
gcagaaactcttgagattggttatctgattgaaagacatcttgcagatggtgatattgtc
atgtttaacagacaaccttcacttcaccaaatgtctattatggctcactatgtgagggta
cttccaggtaagactttcagattacatccttcagtttgtcctccatacaacgcagacttt
gatggggatgagatgaacctccatgttcctcaaagtgaggaagcacgagcagaagcgatt
cttttgatgagagtccaagatcaattaatctctccaagatatggtggtccaattattggt
gcactcagagactttgtaactggagcatatcttttaacaaaagacgaaacaactctttct
attcaggatttctccaatcttgcaatgcttggaggttacaaagatgcacttccaaaacct
gctactaaaacaaaagacggtccagcatacactggaaaacaactattctcactattcttg
ccaaaagacttcaattatgttctcacatcaaaatggtcaaagggaacaaacggtcctgcg
aaagatgttgtaattaaaaatggcgaactcatcagtggtgtaattgataaaacctcaatt
ggcgcagaagaaccagagagtgtcttacacagaattacaaaagactatggaaatgcagta
ggtaaaaacttcttaaattctattctaattatggtaaaacaattcatcacaagttatgga
tttagttatggattcggtgatcttgaagtaccagaaaaagacaaacaacagattctcaat
gatattcaagaaacctatgacatcgtatctgatttgactaatcaatatgaaaaaggaact
ctcaaacttaccagaggtatgagacctgaagaggcacttgaagcatacattgtaaacgaa
ttaggtaaagcaagagacaaggcaggctctactgcaaacaactcactcgataattctaat
gctggaaaaattatggcaaccactggtgccagaggttcgtcgctaaacgtaggtcagatg
gcaggtgctttaggccagcaatcaagaagaggtaatcgactccatgatggctaccacaat
cgtgcattgacacatttccaagaacatgataataatccggacgcacacggatttgtaaaa
tccaattacagagaaggtctctctgcattagaattcttcttccacgcaatgggtggtcgt
gaagggcttgtcgacactgcagttagaacacaacaaagtggatacatgcagcgtaggctg
attaatgcactagaacacattagattggaatatgatggaaccgttagggatccacacggt
cacattgttcaattcctttacggtgaagacggaatagatgttgcaaaaagtgaccatggt
gaagcattcaatgctcacagattagctgaatctcaaacaatgattgattcaggcaaaaag
gcaacaaaagatgaaattgataccatgattaaaaaatacacaaagacgttcagtccaaga
ctcacgtcacttgtatctgaagcattgcatgaatcaaacctaagtaaagatggtgtagag
gcagtatgtaagaaaggattattactttacaacaaagccaaagtagaacctggacaagca
gtgggaattatcactgctcaatcaattggtgaacctggtactcagatgactttgagaacg
ttccattttgcaggaattaaagaaagaaacgtaaccttgggtcttcctagattaattgag
ctagttgatgcaagaaagaaaccagttacgccaactatggatatctatcttgacaacgag
tcaaagaaatccagagaaaaagcaatcgaagttgcaagaaatgtattgcaaacgaaaatc
agcgcattaattgcaaacagtgaaactgattactctactgaaattaaattaattctaagt
gagaacagactaaaagagagaggatgttcaattgctgaagttgaagcatcacttgcatca
aataagaaattcaagatggaaacagtcggtgaactaattactctcaaactagttgaagaa
tctgatactgcaacagtaattgcaatcagaaataaagttctaaacaccactgtaaaaggt
gttccagacattgaacgtgtaactcttgttcaaaaagacgatgaatgggttatccagaca
actggctctaacattgccaaagttcttgaagtaaaaggcattgacaaaacaaatgtcaga
acaaacaatgtgtttgaaattgcaggaactctgggaattgaagctgcacgaaacgcattg
attgatgaacttaatcatactctgggtgaccagggattagaagttgataatagatacatc
atgttagtatctgatttaatgtgctctagaggttacatgcaacaaattggcagacatgga
attgccggtactaaagacagtgttcttgcaagagccgcatttgaaattacagttcctaca
attgcacatgctgcacttggtggtgaaattgaacaactcaaaggtattactgaaaacgta
attgttggtagcaacattccaatcggcagtggaactgttgatctatacatgcaagtaagc
aagaaaaaataa
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