Nitrosopumilus zosterae: NZOSNM25_001779
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Entry
NZOSNM25_001779 CDS
T08647
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NZOSNM25_001779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzt03021
]
NZOSNM25_001779
Transcription machinery [BR:
nzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NZOSNM25_001779
Prokaryotic type
Archaeal type
TFB
NZOSNM25_001779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Sigma70_r4
Ribosomal_S27e
Zn_ribbon_3
HTH_3
Lar_restr_allev
Cyclin_C
YacG
DUF7567
PucR-like_N
Cas12f1-like_TNB
RB_B
Beta-lactamase2
DZR
DmmA-like_C
Ribosomal_S27
DUF7685
Zn_ribbon_LysW
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BDQ31652
LinkDB
All DBs
Position
complement(1478860..1479750)
Genome browser
AA seq
296 aa
AA seq
DB search
MSLQETKCPRCGKNTVITDVDSQEVFCSKCGVVLDEKVNDSRSERIFTNSTVNRSHTGDK
TTLTRHDRGLSTMINPFDKDSSGNPLSASMKSSLKRLRKWDNRSHMKNNDERNLQQALSE
LLKLKEKLSLPDAVVEKASYIYRKALEKKLVRGRSIAALIAAALYAACRESETPRTLQEI
ASSMGIKRKELTASYRLIFKELELKIPVADSVSCIAKIASNAELSEKTKRHAMKILKKAE
KQNALAGKHPMGLAASALYLASIDLEENRTQKDIADAAGITEVTIRNRCKGLRTIL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacaagaaacaaaatgtcctagatgtggaaaaaatactgtgattacagatgta
gactctcaggaagtattctgttccaaatgtggtgtggtactggatgaaaaagtaaatgac
agtagatctgagaggatatttacaaattctaccgtcaacagatctcatactggtgataag
acaaccttgacacgacacgatcgaggtctaagtactatgattaatccctttgacaaagat
tcttctggaaatccattatctgcttcaatgaaatcttctttgaaacgtcttcggaaatgg
gataatagaagtcatatgaaaaataatgatgagcgaaatcttcaacaagcattatcagag
cttttaaaattaaaagaaaaactgtccttgcctgatgcagttgtagaaaaggcatcttac
atctatagaaaagctttggagaaaaaactagtcagaggacgttctattgctgcccttatt
gcagctgcactttatgctgcatgtcgtgaatctgagactccacgtacattgcaagaaatt
gcatcgtcaatgggaataaaaagaaaagaacttactgcaagctatagattgattttcaaa
gaattagaactgaaaatacctgttgctgattctgtttcatgcattgcaaaaattgcaagt
aatgctgaattgtcagaaaaaacaaaacgacatgctatgaaaattctaaaaaaggcagaa
aaacaaaatgcccttgccggaaaacaccctatgggattagctgcatctgcattatatctt
gcaagtatagatttggaagaaaaccgaactcaaaaagacattgccgatgctgcaggcatt
actgaagtaacaataagaaataggtgtaagggtctcaggacaatactatga
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