Nitrosopumilus zosterae: NZOSNM25_001992
Help
Entry
NZOSNM25_001992 CDS
T08647
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NZOSNM25_001992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nzt03019
]
NZOSNM25_001992
03009 Ribosome biogenesis [BR:
nzt03009
]
NZOSNM25_001992
04131 Membrane trafficking [BR:
nzt04131
]
NZOSNM25_001992
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nzt04147
]
NZOSNM25_001992
Messenger RNA biogenesis [BR:
nzt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NZOSNM25_001992
Ribosome biogenesis [BR:
nzt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NZOSNM25_001992
Membrane trafficking [BR:
nzt04131
]
SNARE
SNARE associated proteins
Others
NZOSNM25_001992
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NZOSNM25_001992
Exosome [BR:
nzt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NZOSNM25_001992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
AAA_2
CDC48_2
AAA_22
AAA_14
TIP49
AAA_5
AAA_33
AAA_28
RNA_helicase
Sigma54_activat
IstB_IS21
nSTAND3
AAA_7
AAA_24
NPHP3_N
ATPase
Mg_chelatase
ABC_tran
Bac_DnaA
ATPase_2
TsaE
NACHT
PhoH
DUF815
NB-ARC
AAA_18
Parvo_NS1
ATP-synt_ab
Cytidylate_kin
Zeta_toxin
SLFN-g3_helicase
AAA_3
DUF5906
AAA_17
Motif
Other DBs
NCBI-ProteinID:
BDQ31853
LinkDB
All DBs
Position
1662083..1664269
Genome browser
AA seq
728 aa
AA seq
DB search
MSQSGLSLKVLEAYTRDVGRGVARIDYDSMDTLNASTGDVIEIKGKRRTVAKCLPLYPSD
EGKGIIRIDGLGRNNSGIAIGDTISVRKIKAVAAEKIVVAPLEAIPPIDERYLADALESV
PLIKGDNVMVPYFGGRLTFQVIGVTPAADAVLVTQKTVFHIAEKGETLRGVPQVTYEDIG
GLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESNAHFI
SISGPEIMSKFYGESEARLREIFKEAREKSPSIIFVDEIDSIAPKREEVTGEVERRVVSQ
MLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEIKVPDKKGRKDILAIHSRN
MPLSDDVNIDKISAVSHGYVGADLEYLCKEAAMKCLRRLLPILNLEEEKIPPETLDKLIV
NNDDFLKALIEVTPSGMREVFIENPDVKWDDVGGLEDVKRELQEAVEWPMKYPGLYDKLG
HTMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFKRAR
QSAPCVIFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDGMENMHGVIVLAATNRADMI
DPALLRPGRFDKIIQIPLPDKESRKSILKINAAKIPVIDDASDPQHVDIEKIADLTDGLS
GADTASIANTAVSLVIHEFLDSHPDEKDIEKTTIDAKVTMKHFEEAVKKVREQKDLKLGE
KLVASYYR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagcggtctttctctcaaagttctcgaagcatataccagagatgttgggaga
ggcgtggcaagaatcgattatgattctatggatactctaaatgcctctacaggcgatgtt
atagaaataaaaggtaaaagaagaacagttgcaaaatgccttcctttgtacccatctgat
gaaggaaaaggaattattagaattgatggactcggtagaaataattcaggaattgcaatt
ggagatacaatttcggttagaaaaataaaagcagtggctgcagaaaaaatagtagttgct
ccattagaagcaattcctccaattgatgaaagatatcttgcagatgcactggagagtgtt
ccgttgattaagggcgataatgtaatggttccatattttggtggacgtttaacttttcaa
gttattggagttacccctgcagctgatgcggttttggttactcaaaaaactgttttccat
attgcagaaaaaggagagacattgcgtggagttccacaagtaacctatgaagatattggc
ggtttaacagatgagattaaaaaagtcagagaaatgatagagcttccattaagacatcct
gaaatttttgaaaagttgggaattgaagcaccaaaaggtgtgttgctgtatggtccacca
ggaacaggtaagacattacttgcaaaagcagtagcaaatgaaagtaatgcacattttatc
agtatttcaggtccagaaatcatgagcaagttttacggagagagtgaagctagattaaga
gaaattttcaaagaggcaagagagaaatctccatcaattatctttgttgatgaaatagat
tctattgcaccaaaaagagaagaagttactggagaagttgaaagaagagtagtttctcaa
atgttatcgttaatggatggtctagaagctagaggaaaagtaattgtaatttctgcaaca
aacaggccaaatgcaattgatcctgcacttagaagacctggaagatttgacagagaaatt
gagatcaaagttccagacaaaaaaggaagaaaagacattcttgcaattcacagtagaaac
atgccactatcagacgatgtcaatatagataagatttcagcagtaagtcatggctatgtt
ggagcagacttggaatatctatgtaaagaggctgcaatgaaatgtttgagaagattatta
cctattcttaatttagaagaagaaaaaattccaccagaaactttggataaactaattgtg
aacaatgatgatttcctcaaagctttgattgaagtaacaccatccggtatgagagaagtt
ttcatagagaatccagatgtaaaatgggacgatgttggaggattggaagatgtcaagcgt
gagctgcaagaagctgttgagtggccaatgaaatatcctggtctttacgataaattagga
catactatgccaagagggatcttacttcacggtccaagtggaacaggcaagacattactt
gcaaaagcagtagctacacaaagtgaggcaaactttgtttcagttagaggtcctgagctg
ctatcaaaatgggtaggagaatcagagagaggaatcagagagatcttcaaaagagcacgt
cagtctgcaccatgtgtcatattctttgacgaaatagattcgattgcaccaatcagaggc
gcaggtggagaaactgcagttactgaaagagttgtcagtcaattacttaccgaattagac
ggaatggaaaatatgcatggcgttattgtattagctgcaacaaatagagcagacatgata
gatcctgcattactaaggccaggaagatttgataaaattatccagattccacttccagat
aaagaaagtagaaagagtatcttgaaaattaatgcagcaaaaattccagtaattgacgat
gcaagcgatcctcaacacgtagatattgagaaaattgccgatctaactgatggactcagt
ggtgcagatacagcatccattgcaaacactgcagtatctcttgttattcacgaattttta
gattcacatccagatgaaaaagacattgaaaaaaccaccattgatgcaaaggtaactatg
aagcactttgaggaagcagtaaaaaaagtcagagagcaaaaagatctaaagttaggtgaa
aaactagtggcatcctattacaggtag
DBGET
integrated database retrieval system
