Nitrosopumilus zosterae: NZOSNM25_002101
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Entry
NZOSNM25_002101 CDS
T08647
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nzt
Nitrosopumilus zosterae
Pathway
nzt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nzt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NZOSNM25_002101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nzt03019
]
NZOSNM25_002101
03009 Ribosome biogenesis [BR:
nzt03009
]
NZOSNM25_002101
04131 Membrane trafficking [BR:
nzt04131
]
NZOSNM25_002101
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nzt04147
]
NZOSNM25_002101
Messenger RNA biogenesis [BR:
nzt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NZOSNM25_002101
Ribosome biogenesis [BR:
nzt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NZOSNM25_002101
Membrane trafficking [BR:
nzt04131
]
SNARE
SNARE associated proteins
Others
NZOSNM25_002101
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NZOSNM25_002101
Exosome [BR:
nzt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NZOSNM25_002101
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
CDC48_2
AAA_14
TIP49
AAA_22
nSTAND3
AAA_33
AAA_lid_PRS2_C
Mg_chelatase
AAA_28
RNA_helicase
IstB_IS21
AAA_18
ABC_tran
NPHP3_N
Sigma54_activat
AAA_7
Zeta_toxin
AAA_3
Parvo_NS1
AAA_24
AAA_11
TsaE
nSTAND_NTPase5
AAA_17
AAA_30
DUF815
AAA_19
bpMoxR
Vps4_C
ResIII
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BDQ31959
LinkDB
All DBs
Position
complement(1765477..1767618)
Genome browser
AA seq
713 aa
AA seq
DB search
MSEIVLKIDEIPQQHVGKGRAIVDPKIIEDQKWNTGQILELTYNKKTHVKLWPGTPEEYG
AGIIKVDGMTRQNIGAGIGDKISLKSVEAENAEQVVLSPTEKISAEGLQDYMIYNYLNHV
FTTGDSVSLNTQMGGRVQFVVTSTKPSKPVIVTEETIFKLGSMTKAVDASVPRITYDELG
GLKHEVLKIREMVELPMRHPELFEKIGVDAPKGVLLYGPPGTGKTLLAKAVAGETNAHFI
SLSGPEIMGKYYGESEEKIREIFSQAEENAPSIIFIDEIDSIAPKRDEVSGELEKRIVSQ
LLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDTEGRFDILSIHTRG
MPIDEKVDLKQISKITHGFVGADLEVLSKEAAMRSLRRLLPEIDLDEEKISSEILQKIKI
TSEDFRDALKEVRPSALREVQVQIPDVSWDDVGGLDELKEELLEAVEWPMKYKEAFDYVD
VESPKGILLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKAR
QAAPCIIFLDEVDALVPRRSSGDSGSHVTENVVSQILTEIDGLEELHNVLIIGATNRLDI
VDEALLRPGRFDRIIEVPNPDSKGRQHIFEIHTKKKPLASDVNIGKLVELTEGFSGAEIA
AVANRAAITALKRHVGGKSQIIKDIKITQEDLIDSIDKVKPQKKKATIPQSIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattgttttaaaaatagatgaaattccacaacaacatgttgggaagggtaga
gcaattgttgatcctaaaattattgaggatcagaaatggaatactggacaaattttagaa
ttaacatataacaaaaaaacacatgtaaaactttggccaggtacacctgaagaatatggc
gcaggaataataaaagtcgatggaatgacaagacaaaatatcggtgcaggaattggtgat
aaaatctcactaaaatcagtagaagctgaaaatgcagagcaggttgtattatcaccaaca
gaaaaaatttctgcagaaggattacaagattacatgatttacaattatcttaatcatgtc
tttacaactggagattcagtatctttgaatacacagatgggtggaagagttcagtttgtt
gtaactagcaccaaaccatcaaaaccagtaattgttactgaagaaacaatcttcaaactc
ggttccatgactaaagccgttgatgcatcagttccaagaatcacatatgatgaacttgga
ggcctaaaacatgaagttctaaaaattcgcgagatggttgaattaccaatgagacatcct
gaattatttgaaaagataggtgtagatgcaccaaaaggtgtattattatatggtccacca
ggaactggtaaaaccttacttgccaaagcagtagctggagaaaccaatgctcatttcatt
tcacttagcggccctgaaattatgggtaaatattatggggaaagtgaagagaaaattaga
gaaatattctcacaggctgaagaaaatgcaccaagcataattttcatagatgagattgat
tctattgcaccaaaaagagatgaagtatcaggcgaacttgaaaagagaatagtttcacaa
ctcttaacattaatggatggaatgaaatctcgaggaaaagttgtagtaattgctgcaact
aacagaccagattcaattgatcctgcacttagaagaccaggaagatttgatcgagaaata
gaaattggaattcctgatactgagggaagatttgacattctctcaattcatacacgtgga
atgccaattgatgaaaaagtagatctaaaacaaatctcaaagattacacatggatttgta
ggagctgatttagaagtattatcaaaagaggctgcaatgagatcccttagaagacttctt
cctgagattgatcttgatgaagaaaaaatttcatctgaaattcttcaaaaaattaaaatc
acaagtgaagattttagagatgcattaaaagaagtaagacctagtgctctaagagaagtc
caagtccaaattccagatgttagttgggacgatgttgggggtttagatgaactaaaagaa
gaacttttagaggcagttgagtggcctatgaaatacaaagaagcatttgattatgttgat
gtagaaagtccaaaaggaattttacttcatggtccaccaggaactggtaaaactttgatt
gcaaaagcacttgctaaaatgacggaatctaactttatcagcatcaaaggccctgaacta
ctttcaaaatgggttggcgaatctgaaaaaggagtaagagaaatcttcagaaaagcacga
caagctgcaccatgtattatcttcttagatgaagttgatgcgcttgtaccacgaagaagc
agtggagattcaggttcacatgtaacggaaaatgtagtatctcaaattttaactgaaatt
gatggtctagaagaattacacaacgtattgattattggtgcaaccaacagactagatata
gtagatgaagcattgctaagacctggaagatttgatagaatcattgaagttccaaaccct
gattcaaaaggaagacaacatatcttcgagattcataccaaaaagaaaccactcgcaagt
gatgttaacattggaaaactagtagagttaacagagggtttcagtggtgcagaaattgct
gcagtcgcaaatagagcagcaattacggctttgaagaggcatgttggtggaaaatctcaa
attataaaagacatcaagataacacaagaagatctgattgattcaatcgataaggtaaaa
cctcaaaaaaagaaggctactatccctcaatccataaaatag
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